Pelodictyon phaeoclathratiforme BU-1 |
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Putative Pelodictyon phaeoclathratiforme BU-1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10679
| Sequence length: | GenBank #: | |
| Chromosome: | 3,018,238 bp | CP001110 (NC_011060) |
| Chromosome: | 2,967,835 bp | AAIK00000000 (NZ_AAIK00000000) |
REBASE acronym: PphBU
Org_num: 4397
All begin Ppha_, PphaDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 741 | phage resistance protein | |||
| 743 | R | Smy11118IP (69% identity) | PphBUORF750P | |
| 744 | 85 aa hypothetical protein | |||
| 745 | S | S2.AfeYL25ORF11280P (48% identity) | S.PphBUORF750P | |
| 746 | 172 aa conserved hypothetical protein | |||
| 747 | 66 aa conserved hypothetical protein | |||
| 748 | 76 aa conserved hypothetical protein | |||
| 749 | 288 aa conserved hypothetical protein | |||
| 750 | M | M.PspGSB1ORF8435P (82% identity) | M.PphBUORF750P | |
| 751 | Sel1 domain protein repeat-containing protein | |||
| 752 | 275 aa hypothetical protein | |||
| ??? | M | type I restriction-modification system subunit M | M.PphBUORF753P | |
| 754 | prevent-host-death family protein | |||
| 912 | molybdopterin oxidoreductase | |||
| 913 | M | N-6 DNA methylase | M.PphBUORF913P | |
| 914 | protein of unknown function DUF497 | |||
| 973 | 362 aa hypothetical protein | |||
| ??? | M | 120 aa hypothetical protein ACD_39C01819G0001, partial | M.PphBUORF974P | |
| 975 | transcriptional regulator, XRE family | |||
| 1216 | periplasmic binding protein | |||
| 1217 | R | GspEPRMORF9300P (79% identity) | PphBUORF1218P | |
| 1218 | M | M.GspEPRMORF9300P (84% identity) | M.PphBUORF1218P | |
| 1219 | S | S.AxeHF10ORF14760P (38% identity) | S.PphBUORF1218P | |
| 1220 | pentapeptide repeat protein | |||
| 1451 | 53 aa hypothetical protein | |||
| 1452 | S | S.Dco13527V (40% identity) | S.PphBUORF1454P | |
| 1453 | 63 aa hypothetical protein | |||
| 1454 | M | M.Cph266ORF1130P (96% identity) | M.PphBUORF1454P | |
| 1455 | transcriptional regulator | |||
| 1456 | R | Cph266ORF1130P (97% identity) | PphBUORF1454P | |
| 1458 | PEBP family protein | |||
| 1600 | 351 aa conserved hypothetical protein | |||
| 1601 | S | S.Psp741ORF26925P (48% identity) | S.PphBUORF1601P | |
| 1602 | 118 aa hypothetical protein | |||
| 1603 | 72 aa conserved hypothetical protein | |||
| 1604 | M | M.CphKB01ORFFP (24% identity) | M.PphBUORF1601P | |
| 1607 | peptidase C14 caspase catalytic subunit p20 | |||
| 2392 | 416 aa conserved hypothetical protein | |||
| ??? | S | 95 aa hypothetical protein | S.PphBUORF2396P | |
| 2395 | protein of unknown function DUF1016 | |||
| ??? | M | SAM-dependent DNA methyltransferase | M.PphBUORF2396P | |
| 2397 | diacylglycerol kinase catalytic region | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 152 | SpoVT/AbrB-like protein | |||
| 153 | M | DNA methylase N-4 | M.PphBUORF153P | |
| 154 | 43 aa hypothetical protein | |||
| 162 | 160 aa conserved hypothetical protein | |||
| 163 | M | DNA methylase N-4 | CTAG | M.PphBUORF163AP |
| 164 | transcriptional regulator, XRE family | |||
| 165 | protein of unknown function DUF1044 | |||
| ??? | M | DNA methylase N-4/N-6 domain-containing protein | CTAG | M.PphBUORF163BP |
| 167 | 147 aa conserved hypothetical protein | |||
| 275 | 202 aa conserved hypothetical protein | |||
| ??? | M | M.Bpr4ORF5820P (21% identity) | M.PphBUORF276AP | |
| 277 | transposase IS4 family protein | |||
| ??? | M | M.Bpr4ORF5820P (37% identity) | M.PphBUORF276BP | |
| 278 | helicase domain protein | |||
| 673 | acyltransferase 3 | |||
| 675 | M | M.CphKB01ORFAP (86% identity) | CTAG | M1.PphBUORF675P |
| 676 | M | M.GhaSAP1ORF16085P (61% identity) | M2.PphBUORF675P | |
| ??? | R | TspsG1ORF1671P (66% identity) | PphBUORF675P | |
| 678 | 54 aa hypothetical protein Cpha266_1755 | |||
| 679 | 54 aa hypothetical protein | |||
| ??? | R | PspGSB1ORF360P (28% identity) | CTAG | PphBUORF2054P |
| 681 | 108 aa conserved hypothetical protein | |||
| 1420 | TPR repeat-containing protein | |||
| 1421 | RM | Cph266ORF1300P (29% identity) | PphBUORF1421P | |
| 1422 | helicase domain protein | |||
| 2037 | 1211 aa conserved hypothetical protein | |||
| 2038 | RM | PspHL130ORF7540P (59% identity) | PphBUORF2038P | |
| 2039 | protein of unknown function DUF1016 | |||
| 2194 | prevent-host-death family protein | |||
| ??? | R | 71 aa conserved hypothetical cytosolic protein | CAGCTG | PphBUORF2196P |
| 2196 | M | M.CphKB01ORFMP (88% identity) | CAGCTG | M.PphBUORF2196P |
| 2197 | 60 aa conserved hypothetical protein | |||
| 2868 | Abortive infection protein | |||
| 2869 | M | M.MpsM2ORF12165P (73% identity) | CCGCGG | M.PphBUORF2869P |
| 2870 | R | MpsSph1ORF3237P (80% identity) | CCGCGG | PphBUORF2869P |
| 2871 | pseudogene | |||
| 2911 | helicase domain protein | |||
| 2912 | RM | CphKB01ORFIAP (28% identity) | PphBUORF2911P | |
| 2913 | 517 aa hypothetical protein | |||
| Chromosome | ||||
| 2063 | 108 aa conserved hypothetical protein | |||
| 2054 | R | PspGSB1ORF360P (28% identity) | CTAG | PphBUORF2054P |
| 2055 | HNH endonuclease | |||
| 2249 | 162 aa conserved hypothetical protein | |||
| ??? | M | DNA methylase N-4/N-6 domain-containing protein | CTAG | M.PphBUORF163P |
| 2250 | Helix-turn-helix motif | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 341 | 599 aa hypothetical protein | |||
| 342 | M | M.MspSC29ORF12100P (69% identity) | M.PphBUORF342P | |
| 343 | 167 aa hypothetical protein | |||
| 344 | R | SspF21ORF8510P (67% identity) | PphBUORF342P | |
| 345 | protein-S-isoprenylcysteine | |||
| 1127 | 252 aa conserved hypothetical protein | |||
| 1128 | M | M.MmaLYCORF2622P (55% identity) | M.PphBUORF1128P | |
| 1129 | protein of unknown function DUF1016 | |||
| 1130 | R | MspIM1ORF13175P (80% identity) | PphBUORF1128P | |
| 1131 | toll/interleukin-1 receptor domain-containing protein | |||
| 1978 | protein of unknown function DUF323 | |||
| 1979 | R | Cli1677ORF9975P (76% identity) | PphBUORF1980P | |
| 1980 | M | M.DbaSRB1ORF275P (68% identity) | M.PphBUORF1980P | |
| 1981 | 69 aa hypothetical protein | |||
| 2238 | 266 aa hypothetical protein | |||
| 2239 | R | CspMVAYORF10240P (59% identity) | PphBUORF2240P | |
| 2240 | M | M.Pco19001ORF22915P (59% identity) | M.PphBUORF2240P | |
| 2241 | transcriptional regulator | |||
| Chromosome | ||||
| 1720 | 252 aa conserved hypothetical protein | |||
| 1721 | M | M.MmaLYCORF2622P (55% identity) | M.PphBUORF1128P | |
| 1722 | Protein of unknown function DUF1016 | |||
| 1723 | R | MspIM1ORF13175P (80% identity) | PphBUORF1128P | |
| 1724 | 251 aa hypothetical protein | |||