Nocardiopsis exhalans JCM11759T |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Nocardiopsis exhalans JCM11759T RM systems
Ref: Ping,M. unpublished
REBASE ref # 32850
Complete sequence: 7,506,724 bp
GenBank #: CP099837
REBASE acronym: Nex1759T
Org_num: 60199
All begin NE857_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3495 | site-specific integrase | |||
| ??? | M | M.Ssp064ORFAP (61% identity) | M.Nex1759TORFAP | |
| 3515 | 165 aa hypothetical protein | |||
| 3520 | S | S.Sol21ORF7265P (48% identity) | S.Nex1759TORFAP | |
| 3525 | R | Ssp576ORF19495P (91% identity) | Nex1759TORFAP | |
| 3530 | 390 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9245 | 264 aa hypothetical protein | |||
| 9250 | M | M.Sde5ORF16590P (55% identity) | M.Nex1759TSspAP | |
| 9255 | helix-turn-helix domain-containing protein | |||
| 13355 | SNF2-related protein | |||
| 13360 | RM | NdaN1ORF16970P (67% identity) | Nex1759TORF13360P | |
| 14730 | competence protein CoiA family protein | |||
| ??? | RM | Tal43795ORF5P (59% identity) | Nex1759TORF14735P | |
| 14745 | DUF397 domain-containing protein | |||
| 19075 | alpha/beta hydrolase | |||
| 19080 | RM | Tal43795ORF3805P (55% identity) | Nex1759TORF19080P | |
| 19085 | 199 aa hypothetical protein | |||
| 19200 | DUF397 domain-containing protein | |||
| 19205 | RM | Ssp828ORF32265P (68% identity) | Nex1759TORF19205P | |
| 19210 | DEAD/DEAH box helicase | |||
| 19220 | M | M.Nsp01ORF18390P (69% identity) | M.Nex1759TORF19220P | |
| 19225 | 3-5 exonuclease | |||
| 22035 | methyltransferase domain-containing protein | |||
| 22040 | RM | Ste139ORF800P (53% identity) | Nex1759TORF22040P | |
| 22045 | aminoglycoside phosphotransferase | |||
| 26300 | SNF2-related protein | |||
| 26305 | RM | Usp6237ORF31020P (57% identity) | Nex1759TORF26305P | |
| 26310 | 205 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9905 | DUF4391 domain-containing protein | |||
| 9910 | M | M.Gho31934ORF4845P (76% identity) | M.Nex1759TORF9910P | |
| 9915 | R | MvaJOB5ORF6090P (84% identity) | Nex1759TORF9910P | |
| 9920 | ISAzo13 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13405 | 112 aa hypothetical protein | |||
| 13410 | R | Nal2165Mrr2P (67% identity) | Nex1759TMrrP | |
| 13415 | 55 aa hypothetical protein | |||
| 29960 | TatD family hydrolase | |||
| 29965 | R | Ssp438ORF21640P (45% identity) | Nex1759TORF29965P | |
| 29970 | HNH endonuclease | |||
| 29965 | AAA family ATPase | |||
| 29970 | R | Nfu01801ORF54730P (47% identity) | Nex1759TORF29970P | |
| 29975 | methionine--tRNA ligase | |||