Planktothrix rubescens No.82 |
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Putative Planktothrix rubescens No.82 RM systems
Ref: Blom,J. unpublished
REBASE ref # 11641
| Sequence length: | GenBank #: | |
| chromosome I: | 5,458,967 bp | OW445656 |
| plasmid p1: | 153,388 bp | OW445657 |
| plasmid p2: | 68,572 bp | OW445658 |
| plasmid p3: | 14,692 bp | OW445659 |
REBASE acronym: Pru82
Org_num: 60228
All begin PRNO82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2753 | Ferredoxin-dependent glutamate synthase 2 | |||
| 2754 | M | M.Pru7821ORF2816P (83% identity) | M.Pru82ORF2754P | |
| 2755 | Glycolate oxidase subunit GlcD | |||
| 3351 | 490 aa hypothetical protein | |||
| 3352 | M | M.Pru108ORF4713P (100% identity) | M.Pru82ORF3352P | |
| 3353 | 78 aa hypothetical protein | |||
| 3354 | YcfA family protein | |||
| 3355 | Antitoxin | |||
| 3356 | protein MJ0435 | |||
| 3357 | 73 aa hypothetical protein | |||
| 3358 | 136 aa hypothetical protein | |||
| 3359 | 66 aa hypothetical protein | |||
| 3360 | S | S.Pag1268ORF4132P (62% identity) | S.Pru82ORF3352P | |
| 3361 | 71 aa hypothetical protein | |||
| 3362 | 85 aa hypothetical protein | |||
| 3363 | 137 aa hypothetical protein | |||
| 3364 | R | Pag66ORF326P (98% identity) | Pru82ORF3352P | |
| 3365 | 204 aa hypothetical protein | |||
| 3750 | 307 aa hypothetical protein | |||
| 3751 | S | S.Dsp315AORF3801P (55% identity) | S.Pru82ORF3752P | |
| 3752 | M | M.MaeM03ORF15780P (91% identity) | M.Pru82ORF3752P | |
| 3753 | Precorrin-6A reductase | |||
| plasmid p3 | ||||
| 5078 | M | M.PagC7805ORF4369P (94% identity) | M.Pru82ORF5078P | |
| 5079 | Similarity | |||
| 5080 | 106 aa hypothetical protein | |||
| 5081 | UPF0332 protein | |||
| 5082 | S | S.Ssp33300ORF3411P (31% identity) | S.Pru82ORF5078P | |
| 5083 | 81 aa hypothetical protein | |||
| 5084 | 69 aa hypothetical protein | |||
| ??? | R | PagC7805ORF4369P (65% identity) | Pru82ORF5078P | |
| 5089 | 182 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 141 | 72 aa hypothetical protein | |||
| 142 | M | M.Pru108ORF3050P (100% identity) | M.Pru82ORF142P | |
| 143 | Adenosylhomocysteinase | |||
| 146 | Sugar fermentation stimulation protein homolog | |||
| 147 | M | M.Lfu8579ORF4040P (86% identity) | M.Pru82ORF147P | |
| 148 | R | Ssp6312ORF849P (86% identity) | Pru82ORF147P | |
| 149 | 238 aa hypothetical protein | |||
| 154 | Na(+)/H(+) antiporter NhaS2 | |||
| 155 | RM | Pru7821ORF204P (98% identity) | Pru82ORF155P | |
| 156 | 154 aa hypothetical protein | |||
| 325 | 205 aa hypothetical protein | |||
| 326 | M | M.Pru108ORF2867P (99% identity) | M.Pru82ORF326P | |
| 327 | Modification methylase HincII | |||
| 326 | Modification methylase RsrI | |||
| 327 | M | M.Pru7821ORF373P (99% identity) | M.Pru82ORF327P | |
| 328 | Cold shock-like protein CspC | |||
| 443 | PIN domain protein like protein | |||
| 444 | RM | Pru7821ORF489P (94% identity) | Pru82ORF444P | |
| 445 | 80 aa hypothetical protein | |||
| 876 | 812 aa hypothetical protein | |||
| 877 | R | Pru7821ORF929P (100% identity) | Pru82ORF878P | |
| 878 | M | M.Pru7821ORF929P (100% identity) | M.Pru82ORF878P | |
| 879 | 157 aa hypothetical protein | |||
| 900 | Anthranilate phosphoribosyltransferase | |||
| 901 | RM | Pag758ORF3435P (98% identity) | Pru82ORF901P | |
| 902 | GxxExxY protein | |||
| 993 | 220 aa hypothetical protein | |||
| 994 | M | M.Pag204ORF44560P (88% identity) | M.Pru82ORF994P | |
| 995 | 206 aa hypothetical protein | |||
| 1096 | Cysteine desulfurase IscS | |||
| 1097 | M | M.Pru7821ORF1148P (94% identity) | M.Pru82ORF1097P | |
| 1098 | R | Pru7821ORF1149P (99% identity) | Pru82ORF1097P | |
| 1099 | adenylate kinase 5, chloroplastic | |||
| 1194 | 743 aa hypothetical protein | |||
| 1195 | RM | Pru7821ORF1244P (85% identity) | Pru82ORF1195P | |
| 1196 | 29 aa hypothetical protein | |||
| 1300 | Inorganic triphosphatase | |||
| 1301 | RM | Pru108ORF1902P (89% identity) | Pru82ORF1301P | |
| 1302 | CO2 hydration protein | |||
| 1380 | 241 aa hypothetical protein | |||
| 1381 | M | M.Pru7821ORF1437P (100% identity) | M.Pru82ORF1381P | |
| 1383 | protein aq_1220 | |||
| 1445 | Dihydroorotase | |||
| 1446 | M | M.Pru7821ORF1499P (99% identity) | M.Pru82ORF1446P | |
| 1447 | R | Pru7821ORF1499P (100% identity) | Pru82ORF1446P | |
| 1448 | Deoxyribose-phosphate aldolase | |||
| 1500 | Slr0668 protein | |||
| 1501 | RM | PagC7805ORF2306P (84% identity) | Pru82ORF1501P | |
| 1502 | transposase YncI | |||
| 1721 | Peptidase C14, caspase catalytic subunit p20 | |||
| 1722 | M | M.Pag758ORF1879P (95% identity) | M.Pru82ORF1722P | |
| 1723 | Modification methylase HincII | |||
| 1722 | Modification methylase RsrI | |||
| 1723 | M | M.Pag66ORF934P (98% identity) | M.Pru82ORF1723P | |
| 1724 | 170 aa hypothetical protein | |||
| 1892 | Ribosomal protein S12 methylthiotransferase | |||
| 1893 | M | M.Pru108ORF1323P (99% identity) | M.Pru82ORF1893P | |
| 1894 | 200 aa hypothetical protein | |||
| 2024 | phosphoenolpyruvate synthase | |||
| 2025 | R | Pru108ORF1192P (100% identity) | TCTAGA | Pru82ORF2026P |
| 2026 | M | M.Pru7821ORF2065P (100% identity) | M.Pru82ORF2026P | |
| 2027 | 302 aa hypothetical protein | |||
| 2071 | protein Rv2102 | |||
| 2072 | R | Pru7821ORF2115BP (100% identity) | Pru82ORF2078BP | |
| 2073 | Transposase for transposon Tn1546 | |||
| 2074 | 87 aa hypothetical protein | |||
| 2075 | 132 aa hypothetical protein | |||
| 2076 | Tyrosine recombinase XerC | |||
| 2077 | R | Pru7821ORF2115AP (100% identity) | Pru82ORF2078AP | |
| 2078 | M | M.Pru7821ORF2115P (100% identity) | M.Pru82ORF2078P | |
| 2079 | reverse transcriptase | |||
| 2084 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |||
| 2085 | M | M.Pru108ORF1137P (100% identity) | M.Pru82ORF2085P | |
| 2086 | 155 aa hypothetical protein | |||
| 2127 | GTPase Der | |||
| 2128 | RM | PagC7805ORF1734P (99% identity) | Pru82ORF2128P | |
| 2129 | 102 aa hypothetical protein | |||
| 2144 | 189 aa hypothetical protein | |||
| 2145 | M | M.Pru108ORF1078P (100% identity) | M.Pru82ORF2145P | |
| 2146 | 114 aa hypothetical protein | |||
| 2320 | Polyphosphate:ADP phosphotransferase | |||
| 2321 | RM | Pru108ORF902P (100% identity) | Pru82ORF2321P | |
| 2322 | 66 aa hypothetical protein | |||
| 2478 | 105 aa hypothetical protein | |||
| 2479 | RM | Pru7821ORF2525P (99% identity) | Pru82ORF2479P | |
| 2480 | adenine-specific methylase MJECS02 | |||
| 2479 | Type IIS restriction enzyme Eco57I | |||
| 2480 | RM | Pag758ORF2603P (98% identity) | Pru82ORF2480P | |
| 2481 | 116 aa hypothetical protein | |||
| 2797 | Similar to tr/P73393/P73393 | |||
| 2798 | M | M.Pru108ORF394P (100% identity) | M.Pru82ORF2798P | |
| 2799 | protein SYNPCC7002_A0175 | |||
| 2822 | Tartrate-resistant acid phosphatase type 5 | |||
| 2823 | M | M.Pru7821ORF2889P (93% identity) | M.Pru82ORF2823P | |
| 2824 | 74 aa hypothetical protein | |||
| 2859 | protein HI_1419 | |||
| 2860 | M | M.Pru108ORF333P (97% identity) | M.Pru82ORF2860P | |
| 2861 | Dipeptide transport system permease protein | |||
| 3030 | Prevent-host-death family protein | |||
| 3031 | RM | Pru7821ORF3107P (99% identity) | Pru82ORF3031P | |
| 3032 | 395 aa hypothetical protein | |||
| 3045 | 162 aa hypothetical protein | |||
| 3046 | R | Pru108ORF147P (100% identity) | Pru82ORF3047P | |
| 3047 | M | M.Pru7821ORF3121P (99% identity) | ATGCAT | M.Pru82ORF3047P |
| 3048 | Arsenite methyltransferase | |||
| 3088 | Light-induced protein, chloroplastic | |||
| 3089 | R | Cspisl2ORF1420P (52% identity) | Pru82ORF3090P | |
| 3090 | M | M.Pru108ORF104P (100% identity) | M.Pru82ORF3090P | |
| 3091 | 226 aa hypothetical protein | |||
| 3105 | tRNA dimethylallyltransferase | |||
| 3106 | M | M.Pru7821ORF3178P (100% identity) | M.Pru82ORF3106P | |
| 3107 | zinc protease SCO5738 | |||
| 3261 | Glyceraldehyde-3-phosphate dehydrogenase 1 | |||
| 3262 | RM | Pru108ORF4801P (98% identity) | Pru82ORF3262P | |
| 3263 | Toxin Doc | |||
| 3446 | Type-2 restriction enzyme BsuBI | |||
| 3447 | M | M.Pru108ORF4611P (84% identity) | M.Pru82ORF3447P | |
| 3448 | 123 aa hypothetical protein | |||
| 3512 | 293 aa hypothetical protein | |||
| 3513 | M | M.Pru7821ORF3590P (100% identity) | M.Pru82ORF3513P | |
| 3514 | ABC transporter ATP-binding protein | |||
| 3553 | 159 aa hypothetical protein | |||
| 3554 | R | Pru7821ORF3634P (100% identity) | Pru82ORF3555P | |
| 3555 | M | M.Pru7821ORF3634P (99% identity) | M.Pru82ORF3555P | |
| 3556 | Linearmycin resistance ATP-binding protein LnrL | |||
| 4054 | 206 aa hypothetical protein | |||
| 4055 | M | M.Pag758ORF4568P (99% identity) | M.Pru82ORF4055P | |
| 4056 | DNA polymerase III subunit alpha | |||
| 4111 | 562 aa hypothetical protein | |||
| 4112 | RM | Pru108ORF3944P (98% identity) | Pru82ORF4112P | |
| 4113 | Phycobiliprotein ApcE | |||
| 4128 | Ribosome-binding ATPase YchF | |||
| 4129 | M | M.Pag758ORF4640P (100% identity) | M.Pru82ORF4129P | |
| 4130 | Energy-coupling factor transporter ATP-binding | |||
| 4150 | 125 aa hypothetical protein | |||
| 4151 | RM | Pru7821ORF4240P (96% identity) | Pru82ORF4151P | |
| 4152 | 34 aa hypothetical protein | |||
| 4292 | Antitoxin | |||
| 4293 | M | M.Pru108ORF3765P (100% identity) | M.Pru82ORF4293P | |
| 4294 | WD repeat-containing protein alr2800 | |||
| 4332 | Sensor histidine kinase WalK | |||
| 4333 | M | M.Pru7821ORF4427P (95% identity) | M.Pru82ORF4333P | |
| 4334 | R | Pru7821ORF4427P (95% identity) | Pru82ORF4333P | |
| 4335 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
| 4654 | 520 aa hypothetical protein | |||
| 4655 | R | Pru7821ORF4748P (100% identity) | Pru82ORF4655P | |
| 4656 | 525 aa hypothetical protein | |||
| 4655 | HNH endonuclease | |||
| 4656 | M | M.Pru7821DndCP (100% identity) | M.Pru82DndCP | |
| 4657 | 661 aa hypothetical protein | |||
| 4656 | 525 aa hypothetical protein | |||
| 4657 | M | M.Pru108DndDP (99% identity) | M.Pru82DndDP | |
| 4658 | 133 aa hypothetical protein | |||
| 4657 | 661 aa hypothetical protein | |||
| 4658 | M | M.Pru108DndEP (100% identity) | M.Pru82DndEP | |
| 4659 | 175 aa hypothetical protein | |||
| plasmid p1 | ||||
| 4908 | 177 aa hypothetical protein | |||
| 4909 | RM | Ssp6312ORF3349P (43% identity) | Pru82ORF4909P | |
| 4910 | RNA polymerase-associated protein RapA | |||
| 4984 | 395 aa hypothetical protein | |||
| 4985 | RM | Psp001ORF13355P (60% identity) | Pru82ORF4985P | |
| 4986 | ATP-dependent helicase YqhH | |||
| plasmid p2 | ||||
| 5040 | 79 aa hypothetical protein | |||
| ??? | M | M.Pru7821ORF5112P (78% identity) | M.Pru82ORF5041P | |
| 5043 | 70 aa hypothetical protein | |||
| 5044 | REP-associated tyrosine transposase | |||
| 5045 | 73 aa hypothetical protein | |||
| 5046 | 141 aa hypothetical protein | |||
| 5047 | R | Pag365ORF763P (92% identity) | Pru82ORF5041P | |
| 5048 | 535 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 395 | Ycf54-like protein | |||
| 396 | M | M.HspKM1ORFBP (71% identity) | M.Pru82ORF396P | |
| 397 | R | Pag758ORF940P (96% identity) | Pru82ORF396P | |
| 398 | 230 aa hypothetical protein | |||
| 2222 | Ferredoxin | |||
| 2223 | R | Pru7821ORF2272P (100% identity) | Pru82ORF2226P | |
| 2224 | 202 aa hypothetical protein | |||
| 2225 | 58 aa hypothetical protein | |||
| 2226 | M | M.Pru7821ORF2272P (100% identity) | M.Pru82ORF2226P | |
| 2228 | 121 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2684 | 213 aa hypothetical protein | |||
| 2685 | R | Pru108McrBP (89% identity) | Pru82McrBP | |
| 2686 | 38 aa hypothetical protein | |||
| 2687 | R | Pru108McrCP (93% identity) | Pru82McrCP | |
| 2688 | transcription regulator with HTH | |||
| 4388 | Genome sequencing data, contig C299 | |||
| 4389 | R | Pru7821GmrSDP (100% identity) | Pru82GmrSDP | |
| 4390 | Similarity | |||
| 4851 | 308 aa hypothetical protein | |||
| 4852 | R | Pru7821MrrP (98% identity) | Pru82MrrP | |
| 4853 | SMC protein-like | |||