Planktothrix agardhii No.66 |
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Putative Planktothrix agardhii No.66 RM systems
Ref: Blom,J. unpublished
REBASE ref # 11641
| Sequence length: | GenBank #: | |
| chromosome I: | 4,738,828 bp | LR882963 |
| plasmid p1: | 70,621 bp | LR882964 |
| plasmid p2: | 44,126 bp | LR882965 |
| plasmid p3: | 94,102 bp | LR882966 |
REBASE acronym: Pag66
Org_num: 60220
All begin PANO66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 325 | 490 aa hypothetical protein | |||
| 326 | M | M.Pag7811ORF755P (99% identity) | M.Pag66ORF326P | |
| 327 | Antitoxin | |||
| 328 | protein MJ0435 | |||
| 329 | 77 aa hypothetical protein | |||
| 330 | 136 aa hypothetical protein | |||
| 331 | S | S.Pag7811ORF755P (62% identity) | S.Pag66ORF326P | |
| 332 | 71 aa hypothetical protein | |||
| 333 | 85 aa hypothetical protein | |||
| 334 | 137 aa hypothetical protein | |||
| 335 | R | Pag2AORF1002P (99% identity) | Pag66ORF326P | |
| 336 | 204 aa hypothetical protein | |||
| 836 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
| 837 | M | M.Pag7811ORF1264P (100% identity) | M.Pag66ORF837P | |
| 838 | Genome sequencing data, contig C328 | |||
| 3468 | 194 aa hypothetical protein | |||
| 3469 | M | M.Pag7811ORF3893P (100% identity) | M.Pag66ORF3469P | |
| 3470 | 89 aa hypothetical protein | |||
| plasmid p1 | ||||
| 4362 | 37 aa hypothetical protein | |||
| 4363 | M | M.Psp1811ORFAP (92% identity) | M.Pag66ORF4363P | |
| 4364 | S | S.Tsp106434ORF14170P (27% identity) | S.Pag66ORF4363P | |
| 4365 | transposase for insertion sequence | |||
| 4366 | R | FpsCHN38ORF7300P (39% identity) | Pag66ORF4363P | |
| 4367 | 105 aa hypothetical protein | |||
| plasmid p3 | ||||
| 4463 | Transcriptional Regulator, MerR family | |||
| 4464 | M | M.Pag2AORF2631P (94% identity) | M.Pag66ORF4464P | |
| 4465 | S | S.Pps713ORF2838P (37% identity) | S.Pag66ORF4464P | |
| 4466 | R | Pag2AORF2631P (95% identity) | Pag66ORF4464P | |
| 4467 | protein Rv1954A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 157 | Linearmycin resistance ATP-binding protein LnrL | |||
| 158 | M | M.Pag7811ORF569P (100% identity) | M.Pag66ORF158P | |
| 159 | 159 aa hypothetical protein | |||
| 200 | ABC transporter ATP-binding protein | |||
| 201 | M | M.PagC7805ORF200P (100% identity) | CAGCTG | M.Pag66ORF201P |
| 202 | 293 aa hypothetical protein | |||
| 409 | Type-2 restriction enzyme BsuBI | |||
| 410 | M | M.Pag365ORF827P (100% identity) | M.Pag66ORF410P | |
| 411 | 123 aa hypothetical protein | |||
| 630 | 241 aa hypothetical protein | |||
| 631 | M | M.Pag976ORF4198P (100% identity) | M.Pag66ORF631P | |
| 633 | Undecaprenyl | |||
| 690 | Dihydroorotase | |||
| 691 | M | M.Pag7811ORF1114P (99% identity) | M.Pag66ORF691P | |
| 692 | Deoxyribose-phosphate aldolase | |||
| 741 | 40 aa hypothetical protein | |||
| 742 | RM | Pag7811ORF1166P (98% identity) | Pag66ORF742P | |
| 743 | Adenylate cyclase 1 | |||
| 932 | Metacaspase-1A | |||
| 933 | M | M.PagC7805ORF2102P (96% identity) | M.Pag66ORF933P | |
| 934 | Modification methylase HincII | |||
| 933 | Modification methylase RsrI | |||
| 934 | M | M.Pag2AORF1611P (97% identity) | M.Pag66ORF934P | |
| 935 | 81 aa hypothetical protein | |||
| 1184 | phosphoenolpyruvate synthase | |||
| 1185 | R | Pru82ORF2026P (100% identity) | TCTAGA | Pag66ORF1186P |
| 1186 | M | M.Pag7811ORF1632P (100% identity) | M.Pag66ORF1186P | |
| 1187 | 95 aa hypothetical protein | |||
| 1231 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |||
| 1232 | M | M.Pag7811ORF1679P (100% identity) | M.Pag66ORF1232P | |
| 1233 | 155 aa hypothetical protein | |||
| 1279 | GTPase Der | |||
| 1280 | RM | Pag2AORF1966P (99% identity) | Pag66ORF1280P | |
| 1281 | 102 aa hypothetical protein | |||
| 1290 | 189 aa hypothetical protein | |||
| 1291 | M | M.Pag7811ORF1745P (100% identity) | M.Pag66ORF1291P | |
| 1292 | 56 aa hypothetical protein | |||
| 1441 | 97 aa hypothetical protein | |||
| 1442 | RM | Pag204ORF19630P (99% identity) | Pag66ORF1442P | |
| 1443 | 66 aa hypothetical protein | |||
| 1553 | 72 aa hypothetical protein | |||
| 1554 | RM | PagC7805ORF1459P (99% identity) | Pag66ORF1554P | |
| 1555 | 116 aa hypothetical protein | |||
| 1862 | 430 aa hypothetical protein | |||
| 1863 | R | Pag2AORF2542P (100% identity) | Pag66ORF1864P | |
| 1864 | M | M.Pag365ORF1499P (100% identity) | M.Pag66ORF1864P | |
| 1865 | protein SYNPCC7002_A0175 | |||
| 1886 | 55 aa hypothetical protein | |||
| 1887 | M | M.Pag365ORF1475P (100% identity) | M.Pag66ORF1887P | |
| 1888 | 91 aa hypothetical protein | |||
| 1916 | Ribonuclease 3 | |||
| 1917 | M | M.Pag2AORF2595P (100% identity) | M.Pag66ORF1917P | |
| 1918 | Dipeptide transport system permease protein | |||
| 1958 | CO2 hydration protein | |||
| 1959 | RM | PagC7805ORF1021P (95% identity) | Pag66ORF1959P | |
| 1960 | Antitoxin MazE | |||
| 2041 | 29 aa hypothetical protein | |||
| 2042 | RM | Pag976ORF1308P (99% identity) | Pag66ORF2042P | |
| 2043 | 743 aa hypothetical protein | |||
| 2120 | 247 aa hypothetical protein | |||
| 2121 | R | Pag976ORF1392P (100% identity) | Pag66ORF2122P | |
| 2122 | M | M.Pag976ORF1392P (100% identity) | M.Pag66ORF2122P | |
| 2123 | Cysteine desulfurase IscS | |||
| 2263 | Sulfite reductase [ferredoxin] | |||
| 2264 | RM | Pag7811ORF2732P (99% identity) | Pag66ORF2264P | |
| 2265 | Anthranilate phosphoribosyltransferase | |||
| 2349 | Ribonuclease D | |||
| 2350 | M | M.PagC7805ORF630P (100% identity) | AGATCT | M.Pag66ORF2350P |
| 2352 | 304 aa hypothetical protein | |||
| 2511 | Prevent-host-death family protein | |||
| 2512 | RM | Pag365ORF2947P (99% identity) | Pag66ORF2512P | |
| 2513 | 395 aa hypothetical protein | |||
| 2519 | NAD(P) transhydrogenase subunit alpha part 1 | |||
| 2520 | R | Pag2AORF3205P (100% identity) | Pag66ORF2521P | |
| 2521 | M | M.Pag2AORF3205P (100% identity) | ATGCAT | M.Pag66ORF2521P |
| 2522 | Methyltransferase type 11 | |||
| 2547 | Light-induced protein, chloroplastic | |||
| 2548 | R | Pru108ORF104P (100% identity) | CYCGRG | Pag66ORF2549P |
| 2549 | M | M.Pag1268ORF2052P (99% identity) | M.Pag66ORF2549P | |
| 2550 | 226 aa hypothetical protein | |||
| 2762 | Lipid-A-disaccharide synthase | |||
| 2763 | M | M.Pag976ORF2046P (100% identity) | M.Pag66ORF2763P | |
| 2764 | R | Pag976ORF2046P (100% identity) | Pag66ORF2763P | |
| ??? | C | C.Pag976ORF2046P (100% identity) | C.Pag66ORF2763P | |
| 2765 | 169 aa hypothetical protein | |||
| 2850 | PKHD-type hydroxylase tll1907 | |||
| 2851 | RM | Pag7811ORF3327P (99% identity) | Pag66ORF2851P | |
| 2852 | 139 aa hypothetical protein | |||
| 3105 | 72 aa hypothetical protein | |||
| 3106 | M | M.Pag7811ORF3595P (100% identity) | M.Pag66ORF3106P | |
| 3107 | Adenosylhomocysteinase | |||
| 3117 | Na(+)/H(+) antiporter NhaS2 | |||
| 3118 | RM | Pag7811ORF3607P (99% identity) | Pag66ORF3118P | |
| 3119 | 154 aa hypothetical protein | |||
| 3211 | Hybrid signal transduction histidine kinase I | |||
| 3212 | M | M.Pag204ORF37650P (98% identity) | M.Pag66ORF3212P | |
| 3213 | 30S ribosomal protein S15 | |||
| 3482 | 519 aa hypothetical protein | |||
| 3483 | R | Pag7811ORF3908P (48% identity) | Pag66ORF3483P | |
| 3484 | 537 aa hypothetical protein | |||
| 3483 | 322 aa hypothetical protein | |||
| 3484 | M | M.Csp2100DndCP (59% identity) | M.Pag66DndCP | |
| 3485 | 661 aa hypothetical protein | |||
| 3484 | 537 aa hypothetical protein | |||
| 3485 | M | M.Pag7811DndDP (99% identity) | M.Pag66DndDP | |
| 3486 | DNA sulfur modification protein DndE | |||
| 3485 | 661 aa hypothetical protein | |||
| 3486 | M | M.PagC7805DndEP (100% identity) | M.Pag66DndEP | |
| 3487 | 175 aa hypothetical protein | |||
| 3776 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
| 3777 | R | Pru7821ORF4427P (100% identity) | Pag66ORF3778P | |
| 3778 | M | M.Pru7821ORF4427P (100% identity) | M.Pag66ORF3778P | |
| 3779 | Sensor protein kinase WalK | |||
| 3814 | WD repeat-containing protein alr2800 | |||
| 3815 | M | M.Pag365ORF4179P (96% identity) | M.Pag66ORF3815P | |
| 3816 | Antitoxin | |||
| 3861 | Protease HtpX homolog | |||
| 3862 | C | C.PagC7805ORF3889P (100% identity) | C.Pag66ORF3864P | |
| 3863 | R | PagC7805ORF3889P (100% identity) | Pag66ORF3864P | |
| 3864 | M | M.PagC7805ORF3889P (100% identity) | M.Pag66ORF3864P | |
| 3865 | Ribonuclease J | |||
| 3963 | 562 aa hypothetical protein | |||
| 3964 | RM | PagC7805ORF3978P (99% identity) | Pag66ORF3964P | |
| 3965 | Phycobiliprotein ApcE | |||
| 3978 | Ribosome-binding ATPase YchF | |||
| 3979 | M | M.Pag1268ORF3445P (100% identity) | M.Pag66ORF3979P | |
| 3980 | 34 aa hypothetical protein | |||
| 4033 | Diaminopimelate decarboxylase | |||
| 4034 | M | M.Pag7811ORF82P (99% identity) | M.Pag66ORF4034P | |
| 4035 | 31 aa hypothetical protein | |||
| plasmid p1 | ||||
| 4344 | 119 aa hypothetical protein | |||
| 4345 | RM | PagC7805ORF4359P (93% identity) | Pag66ORF4345P | |
| 4346 | UPF0213 protein | |||
| plasmid p2 | ||||
| 4393 | 253 aa hypothetical protein | |||
| 4394 | RM | Pag2AORF4330P (97% identity) | Pag66ORF4394P | |
| 4395 | RNA polymerase-associated protein RapA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1373 | 201 aa hypothetical protein | |||
| 1374 | M | M.Pag7811ORF1828P (99% identity) | M.Pag66ORF1374P | |
| 1376 | 121 aa hypothetical protein | |||
| 2896 | Transposase | |||
| ??? | R | Pag7811ORF3373P (71% identity) | Pag66ORF2897P | |
| 2897 | M | M.PagC7805ORF2983P (100% identity) | M.Pag66ORF2897P | |
| 2898 | Ycf54-like protein | |||
| plasmid p3 | ||||
| 4472 | 38 aa hypothetical protein | |||
| 4473 | M | M.SspB12ORF25610P (62% identity) | M.Pag66ORF4473P | |
| 4474 | 354 aa hypothetical protein | |||
| 4475 | R | Mae9443ORF3180001P (85% identity) | Pag66ORF4473P | |
| 4476 | 154 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1755 | 213 aa hypothetical protein | |||
| 1756 | R | Pag365McrBP (89% identity) | Pag66McrBP | |
| 1757 | 38 aa hypothetical protein | |||
| 1758 | R | Pag1268McrCP (94% identity) | Pag66McrCP | |
| 1759 | transcription regulator with HTH | |||
| 3663 | 308 aa hypothetical protein | |||
| 3664 | R | Pag1268MrrP (100% identity) | Pag66MrrP | |
| 3665 | Old | |||