Planktothrix agardhii No.976 |
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Putative Planktothrix agardhii No.976 RM systems
Ref: Blom,J. unpublished
REBASE ref # 11641
| Sequence length: | GenBank #: | |
| chromosome I: | 4,748,184 bp | LR882952 |
| plasmid p3: | 37,841 bp | LR882955 |
| plasmid p4: | 61,063 bp | LR882956 |
REBASE acronym: Pag976
Org_num: 60222
All begin NO976_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 64 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
| ??? | M | M.PagC7805ORF2203P (74% identity) | M.Pag976ORF65P | |
| 67 | Genome sequencing data, contig C328 | |||
| 68 | protein HI_1395 | |||
| 69 | S | S.Hal12sORF10195P (37% identity) | S.Pag976ORF65P | |
| 70 | R | PagC7805ORF2203P (94% identity) | Pag976ORF65P | |
| 71 | 132 aa hypothetical protein | |||
| 3892 | 490 aa hypothetical protein | |||
| 3893 | M | M.Pag7811ORF755P (98% identity) | M.Pag976ORF3893P | |
| 3894 | 78 aa hypothetical protein | |||
| 3895 | YcfA family protein | |||
| 3896 | Antitoxin | |||
| 3897 | protein MJ0435 | |||
| 3898 | UPF0331 protein | |||
| 3899 | 77 aa hypothetical protein | |||
| 3900 | 136 aa hypothetical protein | |||
| 3901 | 66 aa hypothetical protein | |||
| 3902 | S | S.Pag1268ORF4132P (57% identity) | S.Pag976ORF3893P | |
| 3903 | 103 aa hypothetical protein | |||
| 3904 | 48 aa hypothetical protein | |||
| 3905 | R | Pru108ORF4713P (97% identity) | Pag976ORF3893P | |
| 3906 | 204 aa hypothetical protein | |||
| plasmid p4 | ||||
| 4412 | 325 aa hypothetical protein | |||
| 4413 | M | M.Csp4105ORF43580P (81% identity) | M.Pag976ORF4413P | |
| 4414 | 74 aa hypothetical protein | |||
| 4415 | Transcriptional modulator of MazE/toxin, MazF | |||
| 4416 | S | S.Cty2237ORF1433P (48% identity) | S.Pag976ORF4413P | |
| 4417 | 72 aa hypothetical protein | |||
| 4418 | R | Csp1100ORF3387P (74% identity) | Pag976ORF4413P | |
| 4419 | Tetratricopeptide repeat protein 6 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 165 | Metacaspase-1A | |||
| 166 | M | M.Pru7821ORF1769P (100% identity) | M.Pag976ORF166P | |
| 167 | DNA repair helicase RadD | |||
| 168 | Type III restriction protein res subunit | |||
| 169 | M | M.Pru7821ORF1772P (99% identity) | M.Pag976ORF169P | |
| 170 | 81 aa hypothetical protein | |||
| 373 | tRNA uridine 5-carboxymethylaminomethyl | |||
| 374 | M | M.Pag365ORF2238P (92% identity) | M.Pag976ORF374P | |
| 375 | tRNA uridine 5-carboxymethylaminomethyl | |||
| 423 | phosphoenolpyruvate synthase | |||
| 424 | R | Pru82ORF2026P (100% identity) | TCTAGA | Pag976ORF425P |
| 425 | M | M.PagC7805ORF1828P (100% identity) | TCTAGA | M.Pag976ORF425P |
| 426 | 95 aa hypothetical protein | |||
| 469 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |||
| 470 | M | M.PagC7805ORF1783P (100% identity) | GCSGC | M.Pag976ORF470P |
| 471 | 155 aa hypothetical protein | |||
| 519 | GTPase Der | |||
| 520 | RM | Pag365ORF2087P (99% identity) | Pag976ORF520P | |
| 521 | 102 aa hypothetical protein | |||
| 529 | 189 aa hypothetical protein | |||
| 530 | M | M.Pag758ORF2288P (98% identity) | M.Pag976ORF530P | |
| 531 | 43 aa hypothetical protein | |||
| 687 | protein HI_1198 | |||
| 688 | RM | PagC7805ORF1567P (100% identity) | Pag976ORF688P | |
| 689 | 66 aa hypothetical protein | |||
| 787 | Ycf55-like protein | |||
| 788 | M | M.Pag2AORF2230P (74% identity) | M.Pag976ORF788P | |
| 789 | transposase for insertion sequence | |||
| 790 | R | Pag204ORF20610P (91% identity) | Pag976ORF788P | |
| 791 | 103 aa hypothetical protein | |||
| 797 | 72 aa hypothetical protein | |||
| 798 | RM | Pag365ORF1813P (99% identity) | Pag976ORF798P | |
| 799 | 116 aa hypothetical protein | |||
| 1116 | Similar to tr/P73393/P73393 | |||
| 1117 | M | M.PagC7805ORF1117P (94% identity) | M.Pag976ORF1117P | |
| 1118 | protein SYNPCC7002_A0175 | |||
| 1140 | 55 aa hypothetical protein | |||
| 1141 | M | M.PagC7805ORF1094P (100% identity) | GATC | M.Pag976ORF1141P |
| 1142 | 91 aa hypothetical protein | |||
| 1170 | Ribonuclease 3 | |||
| 1171 | M | M.Pag7811ORF2389P (100% identity) | M.Pag976ORF1171P | |
| 1172 | Dipeptide transport system permease protein | |||
| 1211 | CO2 hydration protein | |||
| 1212 | RM | Pag66ORF1959P (93% identity) | Pag976ORF1212P | |
| 1213 | Antitoxin MazE | |||
| 1307 | 29 aa hypothetical protein | |||
| 1308 | RM | Pag66ORF2042P (99% identity) | Pag976ORF1308P | |
| 1309 | 743 aa hypothetical protein | |||
| 1390 | 247 aa hypothetical protein | |||
| 1391 | R | Pag66ORF2122P (100% identity) | Pag976ORF1392P | |
| 1392 | M | M.Pag7811ORF2590P (100% identity) | M.Pag976ORF1392P | |
| 1393 | Cysteine desulfurase IscS | |||
| 1529 | Sulfite reductase [ferredoxin] | |||
| 1530 | RM | Pag365ORF1105P (100% identity) | Pag976ORF1530P | |
| 1531 | Anthranilate phosphoribosyltransferase | |||
| 1631 | Ribonuclease D | |||
| 1632 | M | M.PagC7805ORF630P (100% identity) | AGATCT | M.Pag976ORF1632P |
| 1634 | 304 aa hypothetical protein | |||
| 1784 | Prevent-host-death family protein | |||
| 1785 | RM | Pag365ORF2947P (99% identity) | Pag976ORF1785P | |
| 1786 | 395 aa hypothetical protein | |||
| 1794 | NAD(P) transhydrogenase subunit alpha part 1 | |||
| 1795 | R | PagC7805ORF2617P (100% identity) | ATGCAT | Pag976ORF1795P |
| 1796 | DNA adenine methyltransferase YhdJ | |||
| 1795 | 305 aa hypothetical protein | |||
| 1796 | M | M.PagC7805ORF2618P (100% identity) | M.Pag976ORF1796P | |
| 1797 | Arsenite methyltransferase | |||
| 1833 | Light-induced protein, chloroplastic | |||
| 1834 | R | Pru108ORF104P (100% identity) | Pag976ORF1835P | |
| ??? | M | M.PagC7805ORF2647P (82% identity) | M.Pag976ORF1835P | |
| 1836 | 226 aa hypothetical protein | |||
| 2045 | 426 aa hypothetical protein | |||
| 2046 | M | M.Pag7811ORF3241P (100% identity) | M.Pag976ORF2046P | |
| 2047 | R | Pag7811ORF3241P (100% identity) | Pag976ORF2046P | |
| ??? | C | C.Pag7811ORF3241P (100% identity) | C.Pag976ORF2046P | |
| 2048 | 169 aa hypothetical protein | |||
| 2130 | PKHD-type hydroxylase tll1907 | |||
| 2131 | RM | Pag365ORF3291P (99% identity) | Pag976ORF2131P | |
| 2132 | 123 aa hypothetical protein | |||
| 2395 | 72 aa hypothetical protein | |||
| 2396 | M | M.Pru82ORF142P (100% identity) | M.Pag976ORF2396P | |
| 2397 | Adenosylhomocysteinase | |||
| 2400 | Sugar fermentation stimulation protein homolog | |||
| 2401 | M | M.Pag1268ORF2624P (100% identity) | M.Pag976ORF2401P | |
| 2402 | 238 aa hypothetical protein | |||
| 2407 | Na(+)/H(+) antiporter NhaS2 | |||
| 2408 | RM | Pag365ORF3560P (99% identity) | Pag976ORF2408P | |
| 2409 | 154 aa hypothetical protein | |||
| 2505 | Hybrid signal transduction histidine kinase I | |||
| 2506 | M | M.Pag365ORF3659P (100% identity) | M.Pag976ORF2506P | |
| 2507 | 30S ribosomal protein S15 | |||
| 2731 | 520 aa hypothetical protein | |||
| 2732 | R | Pag365ORF3851P (100% identity) | Pag976ORF2732P | |
| 2733 | Sulfate adenylyltransferase subunit 2 | |||
| 2732 | 322 aa hypothetical protein | |||
| 2733 | M | M.Pag365DndCP (99% identity) | M.Pag976DndCP | |
| 2734 | 661 aa hypothetical protein | |||
| 2733 | Sulfate adenylyltransferase subunit 2 | |||
| 2734 | M | M.Pag365DndDP (98% identity) | M.Pag976DndDP | |
| 2735 | DNA sulfur modification protein DndE | |||
| 2734 | 661 aa hypothetical protein | |||
| 2735 | M | M.Pru7821DndEP (100% identity) | M.Pag976DndEP | |
| 2736 | 175 aa hypothetical protein | |||
| 3019 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
| 3020 | R | PagC7805ORF3793P (100% identity) | CCSGG | Pag976ORF3021P |
| 3021 | M | M.Pru7821ORF4427P (99% identity) | M.Pag976ORF3021P | |
| 3022 | Sensor histidine kinase WalK | |||
| 3111 | Protease HtpX homolog | |||
| 3112 | C | C.PagC7805ORF3889P (100% identity) | C.Pag976ORF3114P | |
| 3113 | R | PagC7805ORF3889P (100% identity) | Pag976ORF3114P | |
| 3114 | M | M.PagC7805ORF3889P (100% identity) | M.Pag976ORF3114P | |
| 3115 | Ribonuclease J | |||
| 3193 | 562 aa hypothetical protein | |||
| 3194 | RM | Pag204ORF1420P (99% identity) | Pag976ORF3194P | |
| 3195 | Phycobiliprotein ApcE | |||
| 3208 | Ribosome-binding ATPase YchF | |||
| 3209 | M | M.Pag365ORF68P (100% identity) | M.Pag976ORF3209P | |
| 3210 | 34 aa hypothetical protein | |||
| 3261 | Diaminopimelate decarboxylase | |||
| 3262 | M | M.PagC7805ORF4035P (100% identity) | M.Pag976ORF3262P | |
| 3263 | 31 aa hypothetical protein | |||
| 3277 | DNA polymerase III subunit alpha | |||
| 3278 | M | M.Pag7811ORF98P (100% identity) | M.Pag976ORF3278P | |
| 3279 | R | Pag365ORF119P (100% identity) | Pag976ORF3278P | |
| 3280 | D-alanyl-D-alanine carboxypeptidase DacB | |||
| 3591 | DNA methylase N-4/N-6 domain protein (Modular | |||
| 3592 | M | M.PagC7805ORF17P (22% identity) | M.Pag976ORF3592P | |
| 3593 | 69 aa hypothetical protein | |||
| 3728 | Linearmycin resistance ATP-binding protein LnrL | |||
| 3729 | M | M.PagC7805ORF158P (100% identity) | CCTNAGG | M.Pag976ORF3729P |
| 3730 | 95 aa hypothetical protein | |||
| 3770 | ABC transporter ATP-binding protein | |||
| 3771 | M | M.PagC7805ORF200P (100% identity) | CAGCTG | M.Pag976ORF3771P |
| 3772 | 293 aa hypothetical protein | |||
| 3977 | Phosphoribosylamine--glycine ligase | |||
| 3978 | M | M.Pag7811ORF668P (99% identity) | M.Pag976ORF3978P | |
| 3979 | 123 aa hypothetical protein | |||
| 4197 | 241 aa hypothetical protein | |||
| 4198 | M | M.Pag66ORF631P (100% identity) | M.Pag976ORF4198P | |
| 4200 | Undecaprenyl | |||
| 4257 | Dihydroorotase | |||
| 4258 | M | M.Pag7811ORF1114P (99% identity) | M.Pag976ORF4258P | |
| 4259 | Deoxyribose-phosphate aldolase | |||
| plasmid p4 | ||||
| 4453 | 78 aa hypothetical protein | |||
| 4454 | M | M.Pag204ORF44560P (69% identity) | M.Pag976ORF4454P | |
| 4455 | 206 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 613 | 201 aa hypothetical protein | |||
| ??? | M | M.Pag365ORF1990P (90% identity) | M.Pag976ORF614P | |
| 617 | 121 aa hypothetical protein | |||
| 2174 | 103 aa hypothetical protein | |||
| 2175 | M | M.PagC7805ORF2983P (100% identity) | M.Pag976ORF2175P | |
| 2176 | Ycf54-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1009 | 154 aa hypothetical protein | |||
| 1010 | R | Pag1268McrBP (95% identity) | Pag976McrBP | |
| 1011 | 38 aa hypothetical protein | |||
| 1012 | R | Pru7821McrCP (94% identity) | Pag976McrCP | |
| 1013 | transcription regulator with HTH | |||
| plasmid p3 | ||||
| 4384 | transposase for insertion sequence | |||
| 4385 | R | PagC7805GmrSDP (100% identity) | Pag976GmrSDP | |
| 4386 | 99 aa hypothetical protein | |||