Planktothrix agardhii No.365 |
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Putative Planktothrix agardhii No.365 RM systems
Ref: Blom,J. unpublished
REBASE ref # 11641
| Sequence length: | GenBank #: | |
| chromosome I: | 4,711,865 bp | LR882944 |
| plasmid p1: | 64,491 bp | LR882945 |
| plasmid p2: | 39,671 bp | LR882946 |
| plasmid p4: | 135,980 bp | LR882948 |
REBASE acronym: Pag365
Org_num: 60219
All begin NO365_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 733 | 490 aa hypothetical protein | |||
| 734 | M | M.Pru82ORF3352P (99% identity) | M.Pag365ORF734P | |
| 735 | 78 aa hypothetical protein | |||
| 736 | YcfA family protein | |||
| 737 | Antitoxin | |||
| 738 | protein MJ0435 | |||
| 739 | UPF0331 protein | |||
| 740 | 103 aa hypothetical protein | |||
| 741 | S | S.Pru7821ORF3425P (66% identity) | S.Pag365ORF734P | |
| 742 | Helix-turn-helix domain protein | |||
| 743 | 85 aa hypothetical protein | |||
| 744 | 137 aa hypothetical protein | |||
| ??? | R | Pru108ORF4713P (98% identity) | Pag365ORF734P | |
| 747 | 204 aa hypothetical protein | |||
| 2405 | D-ribulose kinase | |||
| 2406 | R | PagC7805ORF2055P (98% identity) | Pag365ORF2409P | |
| 2407 | 80 aa hypothetical protein | |||
| 2408 | nucleic acid-binding protein, contains | |||
| 2409 | M | M.Acy7122ORF4817P (76% identity) | M.Pag365ORF2409P | |
| 2410 | 41 aa hypothetical protein | |||
| 2548 | Type I site-specific deoxyribonuclease | |||
| 2549 | S | S.Pag2AORF1514P (93% identity) | S.Pag365ORF2552P | |
| 2550 | protein HI_1395 | |||
| 2551 | Genome sequencing data, contig C328 | |||
| 2552 | M | M.PagC7805ORF2203P (16% identity) | M.Pag365ORF2552AP | |
| 2553 | M | M.Pag7811ORF1264P (55% identity) | M.Pag365ORF2552BP | |
| 2554 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
| plasmid p1 | ||||
| 4287 | protein SYNPCC7002_B0001 | |||
| 4288 | R | PagC7805ORF4369P (100% identity) | Pag365ORF4297P | |
| 4289 | 69 aa hypothetical protein | |||
| 4290 | 145 aa hypothetical protein | |||
| 4291 | S | S.PagC7805ORF4369P (100% identity) | S.Pag365ORF4297P | |
| 4292 | 44 aa hypothetical protein | |||
| 4293 | UPF0332 protein | |||
| 4294 | 121 aa hypothetical protein | |||
| 4295 | 71 aa hypothetical protein | |||
| 4296 | Similarity | |||
| 4297 | M | M.PagC7805ORF4369P (100% identity) | M.Pag365ORF4297P | |
| 4298 | 72 aa hypothetical protein | |||
| plasmid p4 | ||||
| 4464 | 182 aa hypothetical protein | |||
| 4465 | R | Csp7425ORF3148P (73% identity) | Pag365ORF4467P | |
| 4466 | S | S.Ssp7003ORF14610P (48% identity) | S.Pag365ORF4467P | |
| 4467 | M | M.Pru82ORF5078P (94% identity) | M.Pag365ORF4467P | |
| 4468 | 70 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 50 | 562 aa hypothetical protein | |||
| 51 | RM | Pag2AORF287P (99% identity) | Pag365ORF51P | |
| 52 | Phycobiliprotein ApcE | |||
| 67 | Ribosome-binding ATPase YchF | |||
| 68 | M | M.Pag976ORF3209P (100% identity) | M.Pag365ORF68P | |
| 69 | 34 aa hypothetical protein | |||
| 102 | Diaminopimelate decarboxylase | |||
| 103 | M | M.PagC7805ORF4035P (100% identity) | M.Pag365ORF103P | |
| 104 | 31 aa hypothetical protein | |||
| 118 | DNA polymerase III subunit alpha | |||
| 119 | M | M.Pag976ORF3278P (100% identity) | M.Pag365ORF119P | |
| 120 | R | Pag976ORF3278P (100% identity) | Pag365ORF119P | |
| 121 | D-alanyl-D-alanine carboxypeptidase DacB | |||
| 420 | 126 aa hypothetical protein | |||
| 421 | R | Pag758ORF4193P (42% identity) | Pag365ORF424BP | |
| 422 | R | PagC7805ORF17P (25% identity) | Pag365ORF424AP | |
| 423 | 108 aa hypothetical protein | |||
| 424 | M | M.PagC7805ORF17P (99% identity) | M.Pag365ORF424P | |
| 425 | 69 aa hypothetical protein | |||
| 563 | Linearmycin resistance ATP-binding protein LnrL | |||
| 564 | M | M.PagC7805ORF158P (100% identity) | CCTNAGG | M.Pag365ORF564P |
| 565 | 95 aa hypothetical protein | |||
| 605 | ABC transporter ATP-binding protein | |||
| 606 | M | M.PagC7805ORF200P (100% identity) | CAGCTG | M.Pag365ORF606P |
| 607 | 293 aa hypothetical protein | |||
| 762 | tRNA(fMet)-specific endonuclease VapC | |||
| 763 | M | M.PagC7805ORF365P (90% identity) | M.Pag365ORF763P | |
| 764 | 149 aa hypothetical protein | |||
| 765 | R | Pru82ORF5041P (92% identity) | Pag365ORF763P | |
| 766 | Sulfate adenylyltransferase | |||
| 826 | Type-2 restriction enzyme BsuBI | |||
| 827 | M | M.Pag66ORF410P (100% identity) | M.Pag365ORF827P | |
| 828 | 123 aa hypothetical protein | |||
| 1013 | 304 aa hypothetical protein | |||
| 1015 | M | M.PagC7805ORF630P (100% identity) | AGATCT | M.Pag365ORF1015P |
| 1016 | Ribonuclease D | |||
| 1104 | Anthranilate phosphoribosyltransferase | |||
| 1105 | RM | Pag976ORF1530P (100% identity) | Pag365ORF1105P | |
| 1106 | Sulfite reductase [ferredoxin] | |||
| 1327 | 743 aa hypothetical protein | |||
| 1328 | RM | Pag758ORF3132P (83% identity) | Pag365ORF1328P | |
| 1329 | 29 aa hypothetical protein | |||
| 1403 | Inorganic triphosphatase | |||
| 1404 | RM | Pag758ORF3043P (93% identity) | Pag365ORF1404P | |
| 1405 | CO2 hydration protein | |||
| 1446 | Dipeptide transport system permease protein | |||
| 1447 | M | M.Pag976ORF1171P (100% identity) | M.Pag365ORF1447P | |
| 1448 | Ribonuclease 3 | |||
| 1474 | 91 aa hypothetical protein | |||
| 1475 | M | M.Pag66ORF1887P (100% identity) | M.Pag365ORF1475P | |
| 1476 | 61 aa hypothetical protein | |||
| 1498 | protein SYNPCC7002_A0175 | |||
| 1499 | M | M.Pag66ORF1864P (100% identity) | M.Pag365ORF1499P | |
| 1500 | R | Pag66ORF1864P (99% identity) | Pag365ORF1499P | |
| 1501 | Similar to tr/P73393/P73393 | |||
| 1535 | 40 aa hypothetical protein | |||
| 1536 | M | M.PagC7805ORF1153P (100% identity) | GTCGAC | M.Pag365ORF1536P |
| 1537 | 230 aa hypothetical protein | |||
| 1538 | R | PagC7805ORF1153P (100% identity) | GTCGAC | Pag365ORF1536P |
| 1539 | Ferredoxin-dependent glutamate synthase 2 | |||
| 1812 | 116 aa hypothetical protein | |||
| 1813 | RM | Pag976ORF798P (99% identity) | Pag365ORF1813P | |
| 1814 | 72 aa hypothetical protein | |||
| 1820 | 103 aa hypothetical protein | |||
| 1821 | R | PagC7805ORFAP (100% identity) | GCTAGC | Pag365ORF1822P |
| 1822 | M | M.Pag2AORF2230P (72% identity) | M.Pag365ORF1822P | |
| 1823 | Ycf55-like protein | |||
| 1923 | 66 aa hypothetical protein | |||
| 1924 | RM | Pag66ORF1442P (99% identity) | Pag365ORF1924P | |
| 1925 | protein HI_1198 | |||
| 2003 | Oxalate-binding protein | |||
| 2004 | M | M.EfaTC2ORF8335P (62% identity) | M.Pag365ORF2004P | |
| 2005 | R | DpsORF2034P (55% identity) | Pag365ORF2004P | |
| 2006 | Oxalate-binding protein | |||
| 2076 | 56 aa hypothetical protein | |||
| 2077 | M | M.Pag976ORF530P (98% identity) | M.Pag365ORF2077P | |
| 2078 | 189 aa hypothetical protein | |||
| 2086 | 102 aa hypothetical protein | |||
| 2087 | RM | Pag976ORF520P (99% identity) | Pag365ORF2087P | |
| 2088 | GTPase Der | |||
| 2132 | 155 aa hypothetical protein | |||
| 2133 | M | M.PagC7805ORF1783P (98% identity) | M.Pag365ORF2133P | |
| 2134 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |||
| 2177 | 95 aa hypothetical protein | |||
| 2178 | M | M.Pag204ORF17070P (100% identity) | M.Pag365ORF2178P | |
| 2179 | R | Pru82ORF2026P (100% identity) | TCTAGA | Pag365ORF2178P |
| 2180 | phosphoenolpyruvate synthase | |||
| 2237 | tRNA uridine 5-carboxymethylaminomethyl | |||
| 2238 | M | M.Pag976ORF374P (92% identity) | M.Pag365ORF2238P | |
| 2239 | 414 aa hypothetical protein | |||
| 2443 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 2444 | M | M.PagC7805ORF2092P (100% identity) | ATCGAT | M.Pag365ORF2444P |
| 2445 | R | PagC7805ORF2092P (100% identity) | ATCGAT | Pag365ORF2444P |
| 2446 | Very-long-chain 3-oxoacyl-CoA reductase | |||
| 2451 | 81 aa hypothetical protein | |||
| 2452 | M | M.Pru7821ORF1772P (99% identity) | M.Pag365ORF2452P | |
| 2453 | Type III restriction protein res subunit | |||
| 2454 | DNA repair helicase RadD | |||
| 2455 | M | M.Pru7821ORF1769P (100% identity) | M.Pag365ORF2455P | |
| 2456 | Peptidase C14, caspase catalytic subunit p20 | |||
| 2649 | Adenylate cyclase 1 | |||
| 2650 | RM | Pag1268ORF221P (99% identity) | Pag365ORF2650P | |
| 2651 | 73 aa hypothetical protein | |||
| 2694 | Deoxyribose-phosphate aldolase | |||
| 2695 | M | M.Pag976ORF4258P (96% identity) | M.Pag365ORF2695P | |
| 2696 | Dihydroorotase | |||
| 2756 | Undecaprenyl | |||
| 2758 | M | M.PagC7805ORF2416P (100% identity) | GRCGYC | M.Pag365ORF2758P |
| 2759 | R | Pag7811ORF1055P (94% identity) | GRCGYC | Pag365ORF2758P |
| 2760 | 241 aa hypothetical protein | |||
| 2946 | Prevent-host-death family protein | |||
| 2947 | RM | Pag976ORF1785P (99% identity) | Pag365ORF2947P | |
| 2948 | Serine protease Do-like HtrB | |||
| 2954 | NAD(P) transhydrogenase subunit alpha part 1 | |||
| 2955 | R | Pag66ORF2521P (99% identity) | Pag365ORF2956P | |
| 2956 | M | M.Pag204ORF30400P (97% identity) | ATGCAT | M.Pag365ORF2956P |
| 2957 | Arsenite methyltransferase | |||
| 2992 | Light-induced protein, chloroplastic | |||
| 2993 | R | Pru108ORF104P (100% identity) | Pag365ORF2994P | |
| 2994 | M | M.Pru82ORF3090P (99% identity) | M.Pag365ORF2994P | |
| 2995 | 226 aa hypothetical protein | |||
| 3204 | 58 aa hypothetical protein | |||
| 3205 | M | M.PagC7805ORF2856P (100% identity) | ATTTAAAT | M.Pag365ORF3205P |
| 3206 | R | PagC7805ORF2856P (100% identity) | ATTTAAAT | Pag365ORF3205P |
| 3207 | 78 aa hypothetical protein | |||
| 3217 | Copper-transporting ATPase PAA1, chloroplastic | |||
| 3218 | R | PagC7805ORF2870P (100% identity) | TCCGGA | Pag365ORF3219P |
| 3219 | M | M.PagC7805ORF2870P (100% identity) | TCCGGA | M.Pag365ORF3219P |
| 3220 | Phosphomethylpyrimidine synthase | |||
| 3290 | PKHD-type hydroxylase tll1907 | |||
| 3291 | RM | Pag976ORF2131P (99% identity) | Pag365ORF3291P | |
| 3292 | 123 aa hypothetical protein | |||
| 3547 | 72 aa hypothetical protein | |||
| 3548 | M | M.Pag7811ORF3595P (100% identity) | M.Pag365ORF3548P | |
| 3549 | Adenosylhomocysteinase | |||
| 3552 | Sugar fermentation stimulation protein homolog | |||
| 3553 | M | M.Pag976ORF2401P (99% identity) | M.Pag365ORF3553P | |
| 3554 | 238 aa hypothetical protein | |||
| 3559 | Na(+)/H(+) antiporter NhaS2 | |||
| 3560 | RM | Pag1268ORF2631P (99% identity) | Pag365ORF3560P | |
| 3561 | 154 aa hypothetical protein | |||
| 3658 | Hybrid signal transduction histidine kinase I | |||
| 3659 | M | M.Pag976ORF2506P (100% identity) | M.Pag365ORF3659P | |
| 3660 | 30S ribosomal protein S15 | |||
| 3850 | 520 aa hypothetical protein | |||
| 3851 | R | Pag976ORF2732P (100% identity) | Pag365ORF3851P | |
| 3852 | Sulfate adenylyltransferase subunit 2 | |||
| 3851 | 322 aa hypothetical protein | |||
| 3852 | M | M.Pag976DndCP (99% identity) | M.Pag365DndCP | |
| 3853 | 661 aa hypothetical protein | |||
| 3852 | Sulfate adenylyltransferase subunit 2 | |||
| 3853 | M | M.PagC7805DndDP (99% identity) | M.Pag365DndDP | |
| 3854 | DNA sulfur modification protein DndE | |||
| 3853 | 661 aa hypothetical protein | |||
| 3854 | M | M.PagC7805DndEP (100% identity) | M.Pag365DndEP | |
| 3855 | 175 aa hypothetical protein | |||
| 4139 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
| 4140 | R | Pag7811ORF4197P (99% identity) | Pag365ORF4141P | |
| 4141 | M | M.Pag7811ORF4197P (100% identity) | M.Pag365ORF4141P | |
| 4142 | Sensor protein kinase WalK | |||
| 4178 | WD repeat-containing protein alr2800 | |||
| 4179 | M | M.Pag66ORF3815P (96% identity) | M.Pag365ORF4179P | |
| 4180 | Antitoxin | |||
| plasmid p2 | ||||
| 4367 | Alkaline phosphatase | |||
| 4368 | RM | Pag204ORF45620P (72% identity) | Pag365ORF4368P | |
| 4369 | Twitching motility protein PilT | |||
| plasmid p4 | ||||
| 4418 | RNA polymerase-associated protein RapA | |||
| 4419 | RM | Pag2AORF4330P (76% identity) | Pag365ORF4419P | |
| 4420 | 54 aa hypothetical protein | |||
| 4473 | 66 aa hypothetical protein | |||
| 4474 | RM | Asp43ORFOP (47% identity) | Pag365ORF4474P | |
| 4475 | 434 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1988 | 121 aa hypothetical protein | |||
| 1990 | M | M.Pru82ORF2226P (80% identity) | M.Pag365ORF1990P | |
| 1991 | 201 aa hypothetical protein | |||
| 3333 | Transposase | |||
| 3334 | R | Pag2AORF3581P (97% identity) | Pag365ORF3335P | |
| 3335 | M | M.PagC7805ORF2983P (100% identity) | M.Pag365ORF3335P | |
| 3336 | Ycf54-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1609 | transcription regulator with HTH | |||
| 1610 | R | Pru7821McrCP (96% identity) | Pag365McrCP | |
| 1611 | 38 aa hypothetical protein | |||
| 1612 | R | PagC7805McrBP (98% identity) | Pag365McrBP | |
| 1613 | 213 aa hypothetical protein | |||
| 4027 | 306 aa hypothetical protein | |||
| 4028 | R | Pru108MrrP (99% identity) | Pag365MrrP | |
| 4029 | SMC protein-like | |||
| plasmid p1 | ||||
| 4318 | 242 aa hypothetical protein | |||
| 4319 | R | PagC7805GmrSDP (99% identity) | Pag365GmrSDP | |
| 4320 | transposase for insertion sequence | |||