Planktothrix agardhii NIVA-CYA126/8 |
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Putative Planktothrix agardhii NIVA-CYA126/8 RM systems
Ref: Blom,J. unpublished
REBASE ref # 11641
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,838,015 bp | LR882934 |
| plasmid p1: | 119,566 bp | LR882935 |
| plasmid p3: | 90,502 bp | LR882937 |
REBASE acronym: Pag1268
Org_num: 60217
All begin NIVACYA_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 109 | 241 aa hypothetical protein | |||
| 110 | M | M.PagC7805ORF2416P (100% identity) | GRCGYC | M.Pag1268ORF110P |
| 112 | Undecaprenyl | |||
| 170 | Dihydroorotase | |||
| 171 | M | M.Pag2AORF1375P (100% identity) | M.Pag1268ORF171P | |
| 172 | Deoxyribose-phosphate aldolase | |||
| 220 | 40 aa hypothetical protein | |||
| 221 | RM | Pag365ORF2650P (99% identity) | Pag1268ORF221P | |
| 222 | Adenylate cyclase 1 | |||
| 276 | 50 aa hypothetical protein | |||
| 277 | RM | Afl14aORF7835P (67% identity) | Pag1268ORF277P | |
| 278 | Arginine biosynthesis bifunctional protein ArgJ | |||
| 336 | 336 aa hypothetical protein | |||
| 337 | R | Pso5ORF11515P (40% identity) | Pag1268ORF338P | |
| 338 | M | M.Lsp7376ORF1501P (54% identity) | M.Pag1268ORF338P | |
| 339 | Threonine synthase | |||
| 410 | Metacaspase-1A | |||
| 411 | M | M.Pru7821ORF1769P (100% identity) | M.Pag1268ORF411P | |
| 412 | DNA repair helicase RadD | |||
| 412 | DNA repair helicase RadD | |||
| 413 | M | M.Pag7811ORF1364P (99% identity) | M.Pag1268ORF413P | |
| 414 | 156 aa hypothetical protein | |||
| 615 | tRNA uridine 5-carboxymethylaminomethyl | |||
| 616 | M | M.Pag976ORF374P (99% identity) | M.Pag1268ORF616P | |
| 617 | tRNA uridine 5-carboxymethylaminomethyl | |||
| 664 | phosphoenolpyruvate synthase | |||
| 665 | R | Pag2AORF1872P (100% identity) | Pag1268ORF666P | |
| 666 | M | M.Pag7811ORF1632P (100% identity) | M.Pag1268ORF666P | |
| 667 | 95 aa hypothetical protein | |||
| 711 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |||
| 712 | M | M.Pag7811ORF1679P (100% identity) | M.Pag1268ORF712P | |
| 713 | 155 aa hypothetical protein | |||
| 757 | GTPase Der | |||
| 758 | RM | Pru82ORF2128P (99% identity) | Pag1268ORF758P | |
| 759 | 102 aa hypothetical protein | |||
| 772 | 188 aa hypothetical protein | |||
| 773 | M | M.Pag7811ORF1745P (99% identity) | M.Pag1268ORF773P | |
| 774 | 56 aa hypothetical protein | |||
| 928 | Polyphosphate:ADP phosphotransferase | |||
| 929 | RM | Pag7811ORF1904P (99% identity) | Pag1268ORF929P | |
| 930 | 66 aa hypothetical protein | |||
| 1028 | Ycf55-like protein | |||
| 1029 | M | M.Pag2AORF2230P (100% identity) | M.Pag1268ORF1029P | |
| 1030 | 228 aa hypothetical protein | |||
| 1029 | Modification methylase MwoI | |||
| 1030 | R | Pag2AORF2230P (70% identity) | Pag1268ORF1030BP | |
| 1031 | R | PagC7805ORFAP (25% identity) | Pag1268ORF1030AP | |
| 1032 | 103 aa hypothetical protein | |||
| 1039 | 72 aa hypothetical protein | |||
| 1040 | RM | Ski73ORF8980P (75% identity) | Pag1268ORF1040P | |
| 1041 | 116 aa hypothetical protein | |||
| 1348 | 430 aa hypothetical protein | |||
| 1349 | R | Pag66ORF1864P (100% identity) | Pag1268ORF1350P | |
| 1350 | M | M.Pag2AORF2542P (99% identity) | M.Pag1268ORF1350P | |
| 1351 | protein SYNPCC7002_A0175 | |||
| 1375 | 58 aa hypothetical protein | |||
| 1376 | M | M.Pag66ORF1887P (99% identity) | M.Pag1268ORF1376P | |
| 1377 | 91 aa hypothetical protein | |||
| 1405 | Ribonuclease 3 | |||
| 1406 | M | M.Pag66ORF1917P (100% identity) | M.Pag1268ORF1406P | |
| 1407 | Dipeptide transport system permease protein | |||
| 1446 | CupB | |||
| 1447 | RM | Pru7821ORF1358P (98% identity) | Pag1268ORF1447P | |
| 1448 | Inorganic triphosphatase | |||
| 1530 | 29 aa hypothetical protein | |||
| 1531 | RM | Pru82ORF1195P (84% identity) | Pag1268ORF1531P | |
| 1532 | 743 aa hypothetical protein | |||
| 1610 | 357 aa hypothetical protein | |||
| 1611 | M | M.Pag976ORF1392P (99% identity) | M.Pag1268ORF1611P | |
| 1612 | Cysteine desulfurase IscS | |||
| 1749 | Sulfite reductase [ferredoxin] | |||
| 1750 | RM | Pag7811ORF2732P (99% identity) | Pag1268ORF1750P | |
| 1751 | Anthranilate phosphoribosyltransferase | |||
| 1833 | Ribonuclease D | |||
| 1834 | M | M.PagC7805ORF630P (99% identity) | M.Pag1268ORF1834P | |
| 1836 | 304 aa hypothetical protein | |||
| 1998 | WD40 repeat-containing protein | |||
| 1999 | RM | Pag365ORF2947P (99% identity) | Pag1268ORF1999P | |
| 2000 | 395 aa hypothetical protein | |||
| 2008 | NAD(P) transhydrogenase subunit alpha part 1 | |||
| 2009 | R | Pag66ORF2521P (100% identity) | Pag1268ORF2010P | |
| 2010 | M | M.Pag7811ORF2989P (100% identity) | ATGCAT | M.Pag1268ORF2010P |
| 2011 | Arsenite methyltransferase | |||
| 2050 | Light-induced protein, chloroplastic | |||
| 2051 | R | Pru108ORF104P (100% identity) | Pag1268ORF2052P | |
| 2052 | M | M.Pag66ORF2549P (99% identity) | M.Pag1268ORF2052P | |
| 2053 | 226 aa hypothetical protein | |||
| 2248 | ATP-dependent Clp protease adapter protein ClpS | |||
| 2249 | M | M.Pag7811ORF3227P (100% identity) | M.Pag1268ORF2249P | |
| 2250 | 354 aa hypothetical protein | |||
| 2262 | Lipid-A-disaccharide synthase | |||
| 2263 | M | M.Pag976ORF2046P (100% identity) | M.Pag1268ORF2263P | |
| 2264 | R | Pag976ORF2046P (100% identity) | Pag1268ORF2263P | |
| ??? | C | C.Pag976ORF2046P (100% identity) | C.Pag1268ORF2263P | |
| 2265 | 78 aa hypothetical protein | |||
| 2346 | PKHD-type hydroxylase tll1907 | |||
| 2347 | RM | Pag204ORF33860P (98% identity) | Pag1268ORF2347P | |
| 2348 | 53 aa hypothetical protein | |||
| 2618 | 72 aa hypothetical protein | |||
| 2619 | M | M.Pag7811ORF3595P (100% identity) | M.Pag1268ORF2619P | |
| 2620 | Adenosylhomocysteinase | |||
| 2623 | Sugar fermentation stimulation protein homolog | |||
| 2624 | M | M.Pag976ORF2401P (100% identity) | M.Pag1268ORF2624P | |
| 2625 | 238 aa hypothetical protein | |||
| 2630 | Na(+)/H(+) antiporter NhaS2 | |||
| 2631 | RM | Pag2AORF3808P (99% identity) | Pag1268ORF2631P | |
| 2632 | 154 aa hypothetical protein | |||
| 2725 | Polar-differentiation response regulator DivK | |||
| 2726 | M | M.PagC7805ORF3304P (99% identity) | M.Pag1268ORF2726P | |
| 2727 | R | LspO77ORF2897P (60% identity) | Pag1268ORF2726P | |
| 2728 | 30S ribosomal protein S15 | |||
| 2930 | 520 aa hypothetical protein | |||
| 2931 | R | Pag976ORF2732P (100% identity) | Pag1268ORF2931P | |
| 2932 | Sulfate adenylyltransferase subunit 2 | |||
| 2931 | 322 aa hypothetical protein | |||
| 2932 | M | M.Pag365DndCP (99% identity) | M.Pag1268DndCP | |
| 2933 | 661 aa hypothetical protein | |||
| 2932 | Sulfate adenylyltransferase subunit 2 | |||
| 2933 | M | M.Pag7811DndDP (99% identity) | M.Pag1268DndDP | |
| 2934 | 133 aa hypothetical protein | |||
| 2933 | 661 aa hypothetical protein | |||
| 2934 | M | M.Pru82DndEP (100% identity) | M.Pag1268DndEP | |
| 2935 | 175 aa hypothetical protein | |||
| 3214 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
| 3215 | R | Pag7811ORF4197P (100% identity) | Pag1268ORF3216P | |
| 3216 | M | M.Pag7811ORF4197P (100% identity) | M.Pag1268ORF3216P | |
| 3217 | Sensor protein kinase WalK | |||
| 3312 | Protease HtpX homolog | |||
| 3313 | C | C.PagC7805ORF3889P (100% identity) | C.Pag1268ORF3315P | |
| 3314 | R | PagC7805ORF3889P (100% identity) | Pag1268ORF3315P | |
| 3315 | M | M.PagC7805ORF3889P (100% identity) | M.Pag1268ORF3315P | |
| 3316 | Ribonuclease J | |||
| 3426 | 562 aa hypothetical protein | |||
| 3427 | RM | Pag2AORF287P (99% identity) | Pag1268ORF3427P | |
| 3428 | Phycobiliprotein ApcE | |||
| 3444 | Ribosome-binding ATPase YchF | |||
| 3445 | M | M.Pag66ORF3979P (100% identity) | M.Pag1268ORF3445P | |
| 3446 | 34 aa hypothetical protein | |||
| 3495 | DNA polymerase III subunit alpha | |||
| 3496 | M | M.Pag976ORF3278P (100% identity) | M.Pag1268ORF3496P | |
| 3497 | R | Pag204ORF2090P (100% identity) | Pag1268ORF3496P | |
| 3498 | D-alanyl-D-alanine carboxypeptidase DacB | |||
| 3944 | Linearmycin resistance ATP-binding protein LnrL | |||
| 3945 | M | M.PagC7805ORF158P (100% identity) | CCTNAGG | M.Pag1268ORF3945P |
| 3946 | 95 aa hypothetical protein | |||
| 3986 | ABC transporter ATP-binding protein | |||
| 3987 | M | M.PagC7805ORF200P (100% identity) | CAGCTG | M.Pag1268ORF3987P |
| 3988 | 293 aa hypothetical protein | |||
| 4044 | 123 aa hypothetical protein | |||
| 4045 | M | M.Pag66ORF410P (100% identity) | M.Pag1268ORF4045P | |
| 4046 | Type-2 restriction enzyme BsuBI | |||
| plasmid p1 | ||||
| 4319 | Transcriptional regulatory protein DegU | |||
| 4320 | R | Pag758ORF42P (98% identity) | Pag1268ORF4321P | |
| 4321 | M | M.Pag758ORF42P (97% identity) | M.Pag1268ORF4321P | |
| 4322 | 556 aa hypothetical protein | |||
| plasmid p3 | ||||
| 4507 | Virulence-associated protein I | |||
| 4508 | M | M.Pag204ORF44900P (89% identity) | M.Pag1268ORF4508P | |
| 4509 | ATPase (AAA+ superfamily) | |||
| 4538 | 58 aa hypothetical protein | |||
| 4539 | M | M.Pru108ORF2192P (63% identity) | M.Pag1268ORF4539P | |
| 4540 | Restriction endonuclease EcoRI | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 855 | 201 aa hypothetical protein | |||
| 856 | M | M.Pag7811ORF1828P (100% identity) | M.Pag1268ORF856P | |
| 858 | 121 aa hypothetical protein | |||
| 2391 | 230 aa hypothetical protein | |||
| 2392 | R | Pag7811ORF3373P (100% identity) | Pag1268ORF2393P | |
| 2393 | M | M.Pag7811ORF3373P (100% identity) | M.Pag1268ORF2393P | |
| 2394 | Ycf54-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1246 | 154 aa hypothetical protein | |||
| 1247 | R | Pag976McrBP (95% identity) | Pag1268McrBP | |
| 1248 | 38 aa hypothetical protein | |||
| 1249 | R | PagC7805McrCP (97% identity) | Pag1268McrCP | |
| 1250 | transcription regulator with HTH | |||
| 3102 | Phospholipase DDHD1 | |||
| 3103 | R | Pag66MrrP (100% identity) | Pag1268MrrP | |
| 3104 | Old | |||