Streptococcus pneumoniae TIGR4 |
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Putative Streptococcus pneumoniae TIGR4 RM systems
Ref: Gibson,P.S. et al. unpublished
REBASE ref # 34799
Complete sequence: 2,153,849 bp
GenBank #: CP089948
REBASE acronym: SpnTIGR4
Org_num: 60299
All begin LXA46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2355 | cell envelope | |||
| 2360 | S | S3.Spns521IP (100% identity) | CRAANNNNNNNNCTG | S3.SpnTIGR4ORF2380P |
| 2365 | tyrosine-type DNA invertase PsrA | |||
| 2370 | S | S1.Spnp2ORF4750P (34% identity) | S2.SpnTIGR4ORF2380P | |
| 2375 | S | S1.SpnXen35ORF2555P (100% identity) | CRAANNNNNNNNNTTC | S1.SpnTIGR4ORF2380P |
| 2380 | M | M.SpnXen35ORF2555P (100% identity) | M.SpnTIGR4ORF2380P | |
| 2385 | R | SpnXen35ORF2555P (100% identity) | SpnTIGR4ORF2380P | |
| 2390 | DUF2812 domain-containing protein | |||
| 4100 | ATP-grasp domain-containing protein | |||
| 4105 | M | M.SpnsD39dORF3010P (100% identity) | M.SpnTIGR4ORF4105P | |
| 4110 | S | S1.SpnXen35ORF4400P (100% identity) | GAYNNNNNNTATC | S1.SpnTIGR4ORF4105P |
| 4115 | AbrB family transcriptional regulator | |||
| 4120 | type II toxin-antitoxin system death-on-curing | |||
| 4125 | tyrosine-type recombinase/integrase | |||
| 4130 | S | S3.SpnsD39cORF5255P (91% identity) | S3.SpnTIGR4ORF4105P | |
| 4135 | R | SpnXen35ORF4400P (100% identity) | SpnTIGR4ORF4105P | |
| 4140 | arginine repressor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5680 | L-lactate dehydrogenase | |||
| 5685 | RM | SpnXen35ORF6050BP (100% identity) | TCGAG | SpnTIGR4ORF5685BP |
| 5690 | RM | SpnsD39dORF4855AP (100% identity) | TCGAG | SpnTIGR4ORF5685AP |
| 5695 | type II toxin-antitoxin system RelE/ParE family | |||
| 6225 | 149 aa hypothetical protein | |||
| 6230 | M | M.SpnGR4ORF6605P (100% identity) | M.SpnTIGR4ORF6230P | |
| 6235 | IS1380-like element ISSpn5 family transposase | |||
| 6670 | U32 family peptidase | |||
| 6675 | R | SpnBC2ORF5930P (100% identity) | TCTAGA | SpnTIGR4ORF6680P |
| 6680 | M | M.Spnp6ORF14300P (100% identity) | TCTAGA | M.SpnTIGR4ORF6680P |
| 6685 | AraC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5825 | GMP reductase | |||
| 5830 | R | SpnXen35McrCP (97% identity) | SpnTIGR4McrCP | |
| 5835 | R | SpnXen35McrBP (99% identity) | SpnTIGR4McrBP | |
| 5840 | translation factor (SUA5) | |||