Serratia symbiotica Pl-LLN |
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Putative Serratia symbiotica Pl-LLN RM systems
Ref: Renoz,F. et al. unpublished
REBASE ref # 34878
Complete sequence: 3,054,331 bp
GenBank #: CP098500
REBASE acronym: SsyLLN
Org_num: 60259
All begin M5J15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 375 | M48 family metallopeptidase | |||
| 380 | R | Sma2010ORF1105P (95% identity) | SsyLLNORF400P | |
| 385 | virulence RhuM family protein | |||
| 390 | S | S.Kpn87736ORFBP (23% identity) | S4.SsyLLNORF400P | |
| 395 | S | S.Pca67I (41% identity) | S1.SsyLLNORF400P | |
| 400 | M | M.Kva177V2ORF24570P (94% identity) | M.SsyLLNORF400P | |
| 405 | S | S2.YpsYpse1ORF900P (65% identity) | S2.SsyLLNORF400P | |
| ??? | S | S2.SboRip1ORFAP (33% identity) | S3.SsyLLNORF400P | |
| 410 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1175 | ribulose-phosphate 3-epimerase | |||
| 1180 | M | M.SsyISDamP (98% identity) | M.SsyLLNDamP | |
| 1185 | SPOR domain-containing protein | |||
| 2165 | aspartate/tyrosine/aromatic aminotransferase | |||
| 2170 | M | M.SsyLLNORF4305P (94% identity) | M.SsyLLNORF2170P | |
| 2175 | 222 aa hypothetical protein | |||
| 3995 | 89 aa hypothetical protein | |||
| 4000 | M | M.SsyLLNORF12160P (92% identity) | M.SsyLLNORF4000P | |
| 4005 | bifunctional acetate--CoA ligase family | |||
| 4300 | acyltransferase | |||
| 4305 | M | M.SsyLLNORF11890P (96% identity) | M.SsyLLNORF4305P | |
| 4310 | efflux RND transporter permease subunit | |||
| 4410 | Dam family site-specific | |||
| 4415 | M | M.XgrBMMCBORF9655P (69% identity) | M.SsyLLNORF4415P | |
| 4420 | replication endonuclease | |||
| 4430 | 167 aa hypothetical protein | |||
| 4435 | M | M.Ero144ORF16520P (91% identity) | M.SsyLLNORF4435P | |
| 4440 | 197 aa hypothetical protein | |||
| 5855 | IS256 family transposase | |||
| 5860 | M | M.Ssy241ORF12820P (98% identity) | M.SsyLLNORF5860P | |
| 5865 | phosphatidylglycerophosphatase B | |||
| 7470 | acyltransferase | |||
| 7475 | M | M.Ssy23ORF2495P (95% identity) | M.SsyLLNORF7475P | |
| 7480 | transposase | |||
| 9895 | acyltransferase | |||
| 9900 | M | M.SsyLLNORF12160P (94% identity) | M.SsyLLNORF9900P | |
| 9905 | flavodoxin FldB | |||
| 11095 | 147 aa hypothetical protein | |||
| 11100 | M | M.Ssy23ORF4115P (93% identity) | M.SsyLLNORF11100P | |
| 11105 | antiterminator | |||
| 11885 | IS256 family transposase | |||
| 11890 | M | M.SsyLLNORF4305P (96% identity) | M.SsyLLNORF11890P | |
| 11895 | type II toxin-antitoxin system | |||
| 12155 | IS21 family transposase | |||
| 12160 | M | M.SsyLLNORF4305P (96% identity) | M.SsyLLNORF12160P | |
| 12165 | acyltransferase | |||
| 14460 | ATP-binding protein | |||
| ??? | M | M.SsyVLCORF367P (79% identity) | M.SsyLLNORF14465P | |
| 14470 | bacteriophage antitermination protein Q | |||
| 14475 | DUF968 domain-containing protein | |||
| 14480 | M | M2.SsyVLCORF2296P (82% identity) | M1.SsyLLNORF14480P | |
| 14485 | M | M.SsyVLCORF1479P (91% identity) | M2.SsyLLNORF14480P | |
| 14490 | replication protein P | |||
| 14860 | acyltransferase | |||
| 14865 | M | M.Ssy241ORF4290P (24% identity) | M.SsyLLNORF14865AP | |
| 14870 | M | M.SsyLLNORF4000P (59% identity) | M.SsyLLNORF14865BP | |
| 14875 | NAD-binding protein | |||
| 15940 | IS256 family transposase | |||
| 15945 | M | M.SsyLLNORF4305P (93% identity) | M.SsyLLNORF15945P | |
| 15950 | ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 365 | 80 aa hypothetical protein | |||
| 370 | R | Sma2010MrrP (95% identity) | SsyLLNMrrP | |
| 375 | M48 family metallopeptidase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4405 | 3-5 exoribonuclease | |||
| 4410 | M | M.BspK61ORFHP (78% identity) | M.SsyLLNORF4410P | |
| 4415 | DNA cytosine methyltransferase | |||