Ralstonia solanacearum RS-N |
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Putative Ralstonia solanacearum RS-N RM systems
Ref: Wang,J. unpublished
REBASE ref # 9334
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,726,279 bp | CP099579 |
| chromosome 2: | 2,094,958 bp | CP099580 |
REBASE acronym: RsoRSN
Org_num: 60254
All begin NHF34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 200 | Rrf2 family transcriptional regulator | |||
| 205 | M | M.RsoX05ORF971P (100% identity) | M.RsoRSNORF205P | |
| ??? | R | RsoWR1ORFKP (100% identity) | RsoRSNORF205P | |
| 220 | ATP-binding protein | |||
| 1060 | PIN domain-containing protein | |||
| 1065 | M | M.Mpu6NM7TORFCP (92% identity) | M.RsoRSNORF1065P | |
| 1070 | S | S.SmaM30ORF9585P (94% identity) | S.RsoRSNORF1065P | |
| 1075 | R | BspMSh1ORF136020P (97% identity) | RsoRSNORF1065P | |
| 1080 | SLATT domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1240 | 71 aa hypothetical protein | |||
| 1245 | M | M1.RsoRS24ORF1070P (100% identity) | M1.RsoRSNORF1245P | |
| 1250 | M | M2.RsoYC40ORF234P (100% identity) | M2.RsoRSNORF1245P | |
| 1255 | 121 aa hypothetical protein | |||
| 1355 | type III secretion system YopJ family effector | |||
| 1360 | M | M.RsoSY1ORF10970P (100% identity) | M.RsoRSNORF1360P | |
| 1365 | tape measure protein | |||
| 6850 | DUF6362 family protein | |||
| 6855 | M | M2.Rsp650ORF13700P (100% identity) | M1.RsoRSNORF6855P | |
| 6860 | M | M2.Rsp647ORF4655P (100% identity) | M2.RsoRSNORF6855P | |
| 6865 | DUF86 domain-containing protein | |||
| 6980 | H-NS histone family protein | |||
| 6985 | M | M.Rsp650ORF13560P (100% identity) | M.RsoRSNORF6985P | |
| 6990 | phospholipase D family protein | |||
| 12390 | tryptophan synthase subunit alpha | |||
| 12395 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.RsoRSNORF12395P |
| 12400 | tryptophan synthase subunit beta | |||
| chromosome 2 | ||||
| 25145 | group II intron reverse transcriptase/maturase | |||
| 25150 | M | M1.RsoT78ORF21055P (100% identity) | M1.RsoRSNORF25150P | |
| 25155 | M | M2.RsoT78ORF21055P (100% identity) | M2.RsoRSNORF25150P | |
| 25160 | 121 aa hypothetical protein | |||
| 25425 | mannose-binding lectin protein | |||
| 25430 | M | M.RsoWR1ORFAP (98% identity) | M.RsoRSNORF25430P | |
| 25435 | site-specific DNA-methyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 95 | IS3 family transposase | |||
| 100 | R | RsoWR1MrrP (92% identity) | RsoRSNMrrP | |
| 105 | PLP-dependent transferase | |||