Photobacterium damselae XP-11 |
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Putative Photobacterium damselae XP-11 RM systems
Ref: Wang,L. unpublished
REBASE ref # 29098
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,190,140 bp | CP099545 |
| chromosome 2: | 1,279,385 bp | CP099544 |
REBASE acronym: PdaXP11
Org_num: 60214
All begin NGM67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 12975 | leucine-rich repeat-containing | |||
| 12980 | S | S.Ave1ORFFP (57% identity) | S.PdaXP11ORF12985P | |
| 12985 | M | M.Ple25521ORFCP (98% identity) | M.PdaXP11ORF12985P | |
| 12990 | R | Pda1605ORF7020P (98% identity) | PdaXP11ORF12985P | |
| 12995 | glutaredoxin family protein | |||
| 19350 | restriction endonuclease subunit S | |||
| 19355 | M | M.Vpas10329ORF3030P (98% identity) | M.PdaXP11ORF19355P | |
| 19360 | DNA damage-inducible protein D | |||
| 19365 | S | S.Vsp1105ORF17420P (93% identity) | S.PdaXP11ORF19355P | |
| 19370 | R | Vsp1105ORF17420P (98% identity) | PdaXP11ORF19355P | |
| 19375 | M48 family metallopeptidase | |||
| chromosome 2 | ||||
| 835 | M48 family metallopeptidase | |||
| 840 | R | Pda7592ORF19175P (99% identity) | PdaXP11ORF855P | |
| 845 | S | S2.Pda904681ORFEP (96% identity) | S2.PdaXP11ORF855P | |
| 850 | S | S.VroB64D1ORF18920P (59% identity) | S1.PdaXP11ORF855P | |
| 855 | M | M.PdaRM71ORF16005P (97% identity) | M.PdaXP11ORF855P | |
| 860 | amidohydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 18955 | DUF2970 domain-containing protein | |||
| 18960 | M | M.PdaWu1DamP (100% identity) | GATC | M.PdaXP11DamP |
| 18965 | AAA family ATPase | |||
| chromosome 2 | ||||
| 785 | HD domain-containing protein | |||
| 790 | M | M.Pdaa311ORF34830P (100% identity) | M.PdaXP11ORF790P | |
| 795 | alpha/beta hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 8320 | sporulation protein | |||
| 8325 | R | Pda1411ORF11775P (99% identity) | PdaXP11ORF8325P | |
| 8330 | class I SAM-dependent methyltransferase | |||