Roseomonas mucosa TT14 |
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Putative Roseomonas mucosa TT14 RM systems
Ref: Lee,K. and Son,H. unpublished
REBASE ref # 34359
| Sequence length: | GenBank #: | |
| Chromosome: | 4,320,951 bp | CP099471 |
| plasmid pTT14-2: | 204,011 bp | CP099473 |
| plasmid pTT14-3: | 184,157 bp | CP099474 |
| plasmid pTT14-4: | 146,501 bp | CP099475 |
| plasmid pTT14-9: | 14,603 bp | CP099480 |
REBASE acronym: RmuTT14
Org_num: 59924
All begin NF552_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTT14-2 | ||||
| 22635 | relaxase domain-containing protein | |||
| 22640 | R | Rmu4ORF23610P (96% identity) | RmuTT14ORF22655P | |
| 22645 | DUF4268 domain-containing protein | |||
| 22650 | S | S.Rle14479ORF279P (35% identity) | S.RmuTT14ORF22655P | |
| 22655 | M | M.RmuAD2ORF4527P (95% identity) | M.RmuTT14ORF22655P | |
| 22660 | 160 aa hypothetical protein | |||
| plasmid pTT14-4 | ||||
| 24465 | relaxase domain-containing protein | |||
| 24470 | R | RmuHV3ORF4527P (100% identity) | RmuTT14ORF24485P | |
| 24475 | S | S.RmuPGORF4527P (100% identity) | S.RmuTT14ORF24485P | |
| 24480 | virulence RhuM family protein | |||
| 24485 | M | M.RmuPGORF4527P (100% identity) | M.RmuTT14ORF24485P | |
| 24490 | 132 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5580 | 445 aa hypothetical protein | |||
| 5585 | M | M.Rsp362I (100% identity) | GANTC | M.RmuTT14ORF5585P |
| 5590 | 95 aa hypothetical protein | |||
| 10800 | 78 aa hypothetical protein | |||
| 10805 | M | M1.SroR30ORF5895P (97% identity) | M1.RmuTT14ORF10805P | |
| 10810 | M | M2.Rmu4ORF1345P (87% identity) | M2.RmuTT14ORF10805P | |
| 10815 | HNH endonuclease | |||
| plasmid pTT14-2 | ||||
| 23130 | 228 aa hypothetical protein | |||
| 23135 | M | M.RmuTT14ORF24345P (97% identity) | M.RmuTT14ORF23135P | |
| 23140 | 183 aa hypothetical protein | |||
| plasmid pTT14-3 | ||||
| 23870 | 264 aa hypothetical protein | |||
| 23875 | M | M.Rmu4ORF24165P (97% identity) | M.RmuTT14ORF23875P | |
| 23880 | zincin-like metallopeptidase domain-containing | |||
| plasmid pTT14-4 | ||||
| 24340 | 229 aa hypothetical protein | |||
| 24345 | M | M.RmuAD1ORF3915P (100% identity) | M.RmuTT14ORF24345P | |
| 24350 | 183 aa hypothetical protein | |||
| 24610 | MAE_28990/MAE_18760 family HEPN-like nuclease | |||
| ??? | R | RmuPGORF4715P (75% identity) | RmuTT14ORF24620P | |
| 24620 | M | M.RmuAD1ORF4715P (74% identity) | M.RmuTT14ORF24620P | |
| 24625 | DNA-binding transcriptional regulator | |||
| plasmid pTT14-9 | ||||
| 26315 | 324 aa hypothetical protein | |||
| ??? | M | M1.RxyORF2232P (19% identity) | M.RmuTT14ORF26320P | |
| 26330 | V | V.AspB11ORF176P (50% identity) | V.RmuTT14ORF26320P | |
| 26335 | 92 aa hypothetical protein | |||