Clostridium species 16K-1-R1 |
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Putative Clostridium species 16K-1-R1 RM systems
Ref: Kikuchi,H. unpublished
REBASE ref # 34744
| Sequence length: | GenBank #: | |
| Chromosome: | 3,257,211 bp | CP046515 |
| plasmid unnamed1: | 82,399 bp | CP046516 |
| plasmid unnamed2: | 69,833 bp | CP046517 |
REBASE acronym: Csp1R1
Org_num: 59830
All begin GOM42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5075 | excinuclease ABC subunit A | |||
| 5080 | R | Cpe17aORF4855P (98% identity) | Csp1R1ORF5085P | |
| 5085 | M | M.CpeBNCPORF4955P (99% identity) | M.Csp1R1ORF5085P | |
| 5090 | S | S.Cpe1495ORFAP (64% identity) | S.Csp1R1ORF5085P | |
| 5095 | 369 aa hypothetical protein | |||
| 7280 | SH3 domain-containing protein | |||
| 7285 | R | Cpe3842ORF8560P (100% identity) | Csp1R1ORF7295P | |
| 7290 | S | S.BmaG2ORFCP (41% identity) | S.Csp1R1ORF7295P | |
| 7295 | M | M.Cpe8449II (98% identity) | M.Csp1R1ORF7295P | |
| 7300 | 511 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14160 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14165 | M | M.Cpe10578II (99% identity) | GTATAC | M.Csp1R1ORF14165P |
| 14170 | YhgE/Pip domain-containing protein | |||
| plasmid unnamed1 | ||||
| 14675 | DUF4236 domain-containing protein | |||
| 14680 | M | M.CpeML2ORF15625P (99% identity) | M.Csp1R1ORF14680P | |
| 14685 | 94 aa hypothetical protein | |||
| 14755 | 101 aa hypothetical protein | |||
| 14760 | M | M.CpeML2ORF15715P (100% identity) | M.Csp1R1ORF14760P | |
| 14765 | DUF4417 domain-containing protein | |||
| plasmid unnamed2 | ||||
| 15050 | DUF4417 domain-containing protein | |||
| 15055 | M | M.CpeNE18ORF38P (100% identity) | M.Csp1R1ORF15055P | |
| 15060 | 101 aa hypothetical protein | |||
| 15140 | 94 aa hypothetical protein | |||
| 15145 | M | M.CpeDel1ORF16950P (100% identity) | M.Csp1R1ORF15145P | |
| 15150 | DUF4236 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4930 | 103 aa hypothetical protein | |||
| 4935 | R | CpeC216McrB2P (100% identity) | Csp1R1McrBP | |
| 4940 | R | Cpe903McrCP (100% identity) | Csp1R1McrCP | |
| 4945 | 127 aa hypothetical protein | |||
| 5045 | 99 aa hypothetical protein | |||
| 5050 | R | Cpe83ORF7475P (98% identity) | Csp1R1ORF5050P | |
| 5055 | 62 aa hypothetical protein | |||