Neisseria gonorrhoeae AT159 |
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Putative Neisseria gonorrhoeae AT159 RM systems
Ref: Golparian,D. unpublished
REBASE ref # 34767
Complete sequence: 2,232,771 bp
GenBank #: CP097846
REBASE acronym: NgoAT159
Org_num: 59900
All begin M8779_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3975 | replication-associated recombination protein A | |||
| 3980 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | NgoAT159ORF4010P |
| 3985 | hydroxyacid dehydrogenase | |||
| 3990 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoAT159ORF4010P |
| 3995 | 186 aa hypothetical protein | |||
| 4000 | 279 aa hypothetical protein | |||
| 4005 | 78 aa hypothetical protein | |||
| 4010 | M | M.NgoWSI (87% identity) | GAGNNNNNTAC | M.NgoAT159ORF4010P |
| 4015 | ABC transporter | |||
| 7280 | ATP-dependent Clp protease ATP-binding subunit | |||
| 7285 | R | Ngo10541ORF2525P (100% identity) | NgoAT159ORF7305P | |
| 7290 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.NgoAT159ORF7305P |
| 7295 | S | S2.Ngo10541ORF2525P (100% identity) | GCANNNNNNNNTGC | S1.NgoAT159ORF7305P |
| 7300 | DNA damage-inducible protein D | |||
| 7305 | M | M.NgoJH7ORFLP (100% identity) | M.NgoAT159ORF7305P | |
| 7310 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoAT159ORF35P |
| ??? | modification methylase DpnIIB | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.NgoAT159ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1170 | 48 aa hypothetical protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.NgoAT159ORF1175P |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | CCGG | NgoAT159ORF1175P |
| 1195 | V | V.Ngos1291ORF65P (100% identity) | V.NgoAT159ORF1175P | |
| 1200 | replication initiation factor domain-containing | |||
| 3870 | 3-isopropylmalate dehydrogenase | |||
| 3875 | R | NgoWLORF945P (100% identity) | GGNNCC | NgoAT159ORF3880P |
| 3880 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoAT159ORF3880P |
| 3885 | 3-isopropylmalate dehydratase small subunit | |||
| 5170 | anthranilate synthase component I | |||
| 5175 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoAT159ORF5175P |
| 5180 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoAT159ORF5175P |
| 5185 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 7495 | DNA repair protein RadA | |||
| 7500 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoAT159ORF7500P |
| 7505 | R | NgoAT159ORF7505P (100% identity) | GCSGC | NgoAT159ORF7500P |
| 7510 | H | H.NgoN160ORF1885P (100% identity) | H.NgoAT159ORF7500P | |
| 7515 | uroporphyrinogen decarboxylase | |||
| 7500 | DNA cytosine methyltransferase | |||
| 7505 | R | NgoAT159ORF7500P (100% identity) | GCSGC | NgoAT159ORF7505P |
| 7510 | H | H.NgoN160ORF1885P (100% identity) | H.NgoAT159ORF7505P | |
| 7515 | uroporphyrinogen decarboxylase | |||
| 7535 | 140 aa hypothetical protein | |||
| 7540 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoAT159ORF7540P |
| 7545 | N-6 DNA methylase | |||
| 7820 | phenylalanine--tRNA ligase subunit beta | |||
| 7825 | R | NgoWSORF391P (100% identity) | CCGG | NgoAT159ORF7830P |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.NgoAT159ORF7830P |
| 7840 | V | V.NgoWSORF391P (100% identity) | V.NgoAT159ORF7830P | |
| 7845 | phenylalanine--tRNA ligase subunit alpha | |||
| 8460 | excinuclease ABC subunit UvrA | |||
| 8465 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoAT159ORF8470P |
| 8470 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoAT159ORF8470P |
| 8475 | 62 aa hypothetical protein | |||
| 9770 | cysteine--tRNA ligase | |||
| 9775 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoAT159ORF9780P |
| 9780 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoAT159ORF9780P |
| 9785 | GTPase ObgE | |||
| 10305 | RNA-binding transcriptional accessory protein | |||
| 10310 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.NgoAT159ORF10310P |
| 10315 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoAT159ORF10310P |
| 10320 | R | NgoWSIIIP (100% identity) | GGTGA | NgoAT159ORF10310P |
| 10325 | IS5/IS1182 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3210 | peptidylprolyl isomerase | |||
| 3215 | M | M.NgoTFGA2ORF1109P (100% identity) | CCACC | M.NgoAT159ORF3215P |
| 3220 | R | NgoWPIIP (100% identity) | CCACC | NgoAT159ORF3215P |
| 3225 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3680 | alpha-hydroxy-acid oxidizing protein | |||
| 3685 | R | NgoWPORF742P (100% identity) | GCAGA | NgoAT159ORF3690P |
| ??? | M | M.NgoSH204ORFKP (100% identity) | GCAGA | M.NgoAT159ORF3690P |
| 3700 | tRNA pseudouridine(55) synthase TruB | |||