Porphyromonas gingivalis W50 |
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Putative Porphyromonas gingivalis W50 RM systems
Ref: Aduse-Opoku,J. et al. Mol Oral Microbiol 37 (3), 122-132 (2022)
REBASE ref # 34771
Complete sequence: 2,345,841 bp
GenBank #: CP092048
REBASE acronym: PgiW50
Org_num: 59909
All begin MCS25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2490 | 12 aa hypothetical protein | |||
| 2495 | C | C.Pin2866ORF2135P (100% identity) | C.PgiW50ORF2500P | |
| 2500 | M | M.Pin2866ORF2135P (100% identity) | M.PgiW50ORF2500P | |
| 2505 | S | S.PgiW83ORF544P (63% identity) | S1.PgiW50ORF2500P | |
| 2510 | S | S.Pin2866ORF2135P (41% identity) | S2.PgiW50ORF2500P | |
| 2515 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3925 | phospholipase D-like domain-containing protein | |||
| 3930 | RM | PgiW83ORF862P (100% identity) | RM1.PgiW50ORF3930P | |
| ??? | RM | PgiW83ORFAP (100% identity) | RM2.PgiW50ORF3930P | |
| 3945 | master DNA invertase Mpi family serine-type | |||
| 6615 | 215 aa hypothetical protein | |||
| 6620 | RM | PgiW83ORF1469P (100% identity) | PgiW50ORF6620P | |
| 6625 | PH domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4405 | phosphatidylserine decarboxylase family protein | |||
| 4410 | R | PgiW83MrrP (100% identity) | PgiW50MrrP | |
| 4420 | S-adenosylmethionine:tRNA | |||
| 4425 | IS4-like element IS1598 family transposase | |||
| 4430 | R | PgiW83McrBP (100% identity) | PgiW50McrBP | |
| 4435 | R | PgiW83McrCP (100% identity) | PgiW50McrCP | |
| 4440 | GH92 family glycosyl hydrolase | |||