Rhodococcus pyridinivorans 4-4 |
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Putative Rhodococcus pyridinivorans 4-4 RM systems
Ref: Deng,D. et al. Biology (Basel) 11 (5), 774 (2022)
REBASE ref # 34775
| Sequence length: | GenBank #: | |
| Chromosome: | 4,974,370 bp | CP086069 |
| plasmid p_4-4_A: | 218,612 bp | CP086070 |
REBASE acronym: Rpy44
Org_num: 59920
All begin LLA01_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1235 | acyl-CoA dehydrogenase family protein | |||
| 1240 | V | V.Rsp2GORF22210P (100% identity) | V.Rpy44ORF1245P | |
| 1245 | M | M.RspRDE2ORF2500P (100% identity) | CTCGAG | M.Rpy44ORF1245P |
| 1250 | 507 aa hypothetical protein CFC35_33630 | |||
| plasmid p_4-4_A | ||||
| 23450 | 70 aa hypothetical protein | |||
| 23455 | RM | Rpy44ORF24150P (99% identity) | Rpy44ORF23455P | |
| 23460 | ImmA/IrrE family metallo-endopeptidase | |||
| 24145 | 58 aa hypothetical protein | |||
| 24150 | RM | Rpy44ORF23455P (99% identity) | Rpy44ORF24150P | |
| 24155 | ImmA/IrrE family metallo-endopeptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5855 | redox-regulated ATPase YchF | |||
| 5860 | R | RrhGD02McrCP (85% identity) | Rpy44McrCP | |
| 5865 | R | RspPD04McrBP (93% identity) | Rpy44McrBP | |
| 5870 | alpha/beta hydrolase | |||
| 6375 | carotenoid oxygenase family protein | |||
| 6380 | R | RspXY12MrrP (99% identity) | Rpy44MrrP | |
| 6385 | DUF1906 domain-containing protein | |||
| plasmid p_4-4_A | ||||
| 23415 | 223 aa hypothetical protein | |||
| 23420 | R | Rpy44McrB2P (100% identity) | Rpy44McrB3P | |
| 23425 | R | RpyS2McrCP (95% identity) | Rpy44McrC3P | |
| 23430 | 74 aa hypothetical protein | |||
| 24100 | 223 aa hypothetical protein | |||
| 24105 | R | Rpy44McrB3P (100% identity) | Rpy44McrB2P | |
| 24110 | 113 aa hypothetical protein | |||
| 24115 | R | Rpy44McrC3P (66% identity) | Rpy44McrC2P | |
| 24120 | 74 aa hypothetical protein | |||