Klebsiella pneumoniae 13001 |
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Putative Klebsiella pneumoniae 13001 RM systems
Ref: Chen,L. unpublished
REBASE ref # 24842
| Sequence length: | GenBank #: | |
| Chromosome: | 5,436,073 bp | CP098355 |
| plasmid p13001-QIL: | 113,639 bp | CP098358 |
REBASE acronym: Kpn13001
Org_num: 59610
All begin NB672_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p13001-QIL | ||||
| 28210 | 71 aa hypothetical protein | |||
| 28215 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.Kpn13001ORF28215P |
| 28220 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.Kpn13001ORF28215P |
| 28225 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | Kpn13001ORF28215P |
| 28230 | ISL3-like element ISKpn25 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | cell division protein DamX | |||
| 1795 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn13001DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 6210 | TraR/DksA family transcriptional regulator | |||
| 6215 | M | M.Ksp1927ORF4530P (100% identity) | GATC | M.Kpn13001ORF6215P |
| 6220 | replication endonuclease | |||
| 6965 | 60 aa hypothetical protein | |||
| 6970 | M | M.Kpni512ORF1337P (100% identity) | GATC | M.Kpn13001ORF6970P |
| 6975 | DUF1317 domain-containing protein | |||
| 9475 | phosphohydrolase | |||
| 9480 | M | M.KpnshvKP1DcmP (100% identity) | CCWGG | M.Kpn13001DcmP |
| 9485 | V | V.KspC31DcmP (75% identity) | CCWGG | V.Kpn13001DcmP |
| 9490 | drug/metabolite exporter YedA | |||
| 15900 | regulator | |||
| 15905 | M | M.Ksp1927ORF14405P (100% identity) | GATC | M.Kpn13001ORF15905P |
| 15910 | tyrosine-type recombinase/integrase | |||
| 18185 | replication endonuclease | |||
| 18190 | M | M.Ksp1927ORF17200P (100% identity) | GATC | M.Kpn13001ORF18190P |
| 18195 | TraR/DksA family transcriptional regulator | |||
| 20620 | DUF1317 domain-containing protein | |||
| 20625 | M | M.Kpss50ORF20150P (100% identity) | GATC | M.Kpn13001ORF20625P |
| 20630 | dcm methylase | |||
| 23945 | HNH endonuclease | |||
| 23950 | R | KpnvKP9ORFAP (100% identity) | Kpn13001ORF23950P | |
| 23955 | type VI secretion system tube protein Hcp | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9340 | shufflon system plasmid conjugative transfer | |||
| 9345 | R | Kpni512ORF1793P (100% identity) | CGCATC | Kpn13001ORF9350P |
| 9350 | M | M.Kpni512ORF1793P (100% identity) | CGCATC | M.Kpn13001ORF9350P |
| 9355 | SpnT protein | |||