Escherichia coli Z0117EC0117 |
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Putative Escherichia coli Z0117EC0117 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 34694
Complete sequence: 5,156,910 bp
GenBank #: CP098187
REBASE acronym: Eco0117
Org_num: 59601
All begin NBY25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3990 | endoribonuclease SymE | |||
| 3995 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco0117ORF4005P |
| 4000 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco0117ORF4005P |
| 4005 | M | M.EcoS165ORF17585P (100% identity) | GGYANNNNNGTNG | M.Eco0117ORF4005P |
| 4010 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 780 | 71 aa hypothetical protein | |||
| 785 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco0117ORF785P | |
| 790 | helix-turn-helix domain-containing protein | |||
| 3445 | response regulator receiver domain | |||
| 3450 | R | EcosS3ORF15775P (100% identity) | Eco0117ORF3455P | |
| 3455 | M | M.EcosS3ORF15775P (100% identity) | M.Eco0117ORF3455P | |
| 3460 | conjugal transfer protein TraG N-terminal | |||
| 15065 | drug/metabolite exporter YedA | |||
| 15070 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco0117DcmP |
| 15075 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco0117DcmP |
| 15080 | phosphohydrolase | |||
| 18860 | replication endonuclease | |||
| 18865 | M | M.Eco316ORF2925P (100% identity) | GATC | M.Eco0117ORF18865P |
| 18870 | TraR/DksA family transcriptional regulator | |||
| 22440 | DNA-binding transcriptional regulator Fis | |||
| 22445 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco0117ORF22445P |
| 22450 | DUF2556 family protein | |||
| 23040 | ribulose-phosphate 3-epimerase | |||
| 23045 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0117DamP |
| 23050 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4005 | type I restriction-modification system subunit | |||
| 4010 | R | Ecost88MrrP (100% identity) | Eco0117MrrP | |
| 4015 | 34 aa hypothetical protein | |||