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Putative Escherichia coli EC2648-R2 RM systems
Ref: Qu,H. and Ou,H.-Y. unpublished
REBASE ref # 21278
Complete sequence: 4,601,169 bp
GenBank #: CP084209
REBASE acronym: Eco2648R2
Org_num: 59586
All begin LDB16_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
19030 | adenine/cytosine-specific restriction | |||
19035 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco2648R2ORF19040P |
19040 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco2648R2ORF19040P |
19045 | S | S.EcoVir2ORF19035P (100% identity) | AACNNNNNNGTGC | S.Eco2648R2ORF19040P |
19050 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1660 | cell division protein DamX | |||
1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2648R2DamP |
1670 | ribulose-phosphate 3-epimerase | |||
2290 | DUF2556 family protein | |||
2295 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco2648R2ORF2295P |
2300 | DNA-binding transcriptional regulator Fis | |||
8785 | phosphohydrolase | |||
8790 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2648R2DcmP |
8795 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco2648R2DcmP |
8800 | drug/metabolite exporter YedA | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
12990 | NADP-dependent isocitrate dehydrogenase | |||
12995 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco2648R2ORF12995P |
13000 | site-specific DNA recombinase | |||
19025 | GTPase | |||
19030 | R | SenHNK130MrrP (100% identity) | Eco2648R2MrrP | |
19035 | type I restriction-modification system | |||
19050 | endoribonuclease SymE | |||
19055 | R | EcoVir2McrBP (100% identity) | Eco2648R2McrBP | |
19060 | R | SenHNK130McrCP (100% identity) | Eco2648R2McrCP | |
19065 | 978 aa hypothetical protein |