Escherichia coli EC2648-Vir1 |
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Putative Escherichia coli EC2648-Vir1 RM systems
Ref: Qu,H. and Ou,H.-Y. unpublished
REBASE ref # 21278
Complete sequence: 4,601,157 bp
GenBank #: CP083610
REBASE acronym: EcoVir1
Org_num: 59587
All begin LAJ48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3830 | adenine/cytosine-specific restriction | |||
| 3835 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoVir1ORF3840P |
| 3840 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoVir1ORF3840P |
| 3845 | S | S.EcoVir2ORF19035P (100% identity) | AACNNNNNNGTGC | S.EcoVir1ORF3840P |
| 3850 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9435 | DUF2556 family protein | |||
| 9440 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoVir1ORF9440P |
| 9445 | DNA-binding transcriptional regulator Fis | |||
| 15930 | phosphohydrolase | |||
| 15935 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoVir1DcmP |
| 15940 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoVir1DcmP |
| 15945 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3825 | GTPase | |||
| 3830 | R | SenHNK130MrrP (100% identity) | EcoVir1MrrP | |
| 3835 | type I restriction-modification system | |||
| 3850 | endoribonuclease SymE | |||
| 3855 | R | EcoVir2McrBP (100% identity) | EcoVir1McrBP | |
| 3860 | R | SenHNK130McrCP (100% identity) | EcoVir1McrCP | |
| 3865 | 978 aa hypothetical protein | |||
| 20135 | NADP-dependent isocitrate dehydrogenase | |||
| 20140 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoVir1ORF20140P |
| 20145 | site-specific DNA recombinase | |||