Citrobacter portucalensis GD21SC92T |
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Putative Citrobacter portucalensis GD21SC92T RM systems
Ref: Gao,X. et al. unpublished
REBASE ref # 34688
| Sequence length: | GenBank #: | |
| Chromosome: | 5,143,817 bp | CP089437 |
| plasmid pHN21SC92-2: | 231,384 bp | CP089439 |
REBASE acronym: Cpo92T
Org_num: 59521
All begin LT980_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3710 | 388 aa hypothetical protein | |||
| 3715 | R | CpoF36ORF3755P (99% identity) | Cpo92TORF3725P | |
| 3720 | S | S.EcoPSS16ORF36570P (61% identity) | S.Cpo92TORF3725P | |
| 3725 | M | M.EspWA005ORF14620P (96% identity) | M.Cpo92TORF3725P | |
| 3730 | DUF262 domain-containing protein | |||
| 10035 | 388 aa hypothetical protein | |||
| 10040 | M | M.EcoVEF10ORF18030P (100% identity) | M.Cpo92TORF10040P | |
| 10045 | S | S.EcoMB52ORF10865P (61% identity) | S.Cpo92TORF10040P | |
| 10050 | YecA family protein | |||
| 10055 | R | CsaC767ORF12270P (99% identity) | Cpo92TORF10040P | |
| 10060 | M48 family metallopeptidase | |||
| 21470 | M48 family metallopeptidase | |||
| 21475 | R | Sen12420ORF4202P (99% identity) | Cpo92TORF21485P | |
| 21480 | S | S2.RaqKM05ORF13845P (60% identity) | S.Cpo92TORF21485P | |
| 21485 | M | M.Sen12420ORF4202P (97% identity) | M.Cpo92TORF21485P | |
| 21490 | HrgA protein | |||
| 22365 | DUF262 domain-containing protein | |||
| 22370 | M | M.Ecl71160ORFBP (100% identity) | M.Cpo92TORF22370P | |
| 22375 | S | S.KpnJP20ORF25905P (62% identity) | S.Cpo92TORF22370P | |
| 22380 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.Eco11104DamP (100% identity) | GATC | M.Cpo92TDamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2155 | DUF2556 family protein | |||
| 2160 | M | M.CyoL6ORF2245P (100% identity) | ATGCAT | M.Cpo92TORF2160P |
| 2165 | tyrosine-type recombinase/integrase | |||
| 7025 | 72 aa hypothetical protein | |||
| 7030 | M | M.Cpo92TORF19420P (100% identity) | M.Cpo92TORF7030P | |
| 7035 | 59 aa hypothetical protein | |||
| 7495 | recombination protein NinG | |||
| 7500 | M | M.Cfr49969ORF11355P (99% identity) | M.Cpo92TORF7500P | |
| 7505 | antitermination protein | |||
| 9740 | phosphohydrolase | |||
| 9745 | M | M.CspH1232ORFCP (97% identity) | CCWGG | M.Cpo92TORF9745P |
| 9750 | V | V.Cfr324ORF14230P (99% identity) | V.Cpo92TORF9745P | |
| 9755 | drug/metabolite exporter YedA | |||
| 19415 | 59 aa hypothetical protein | |||
| 19420 | M | M.Cpo92TORF7030P (100% identity) | M.Cpo92TORF19420P | |
| 19425 | 72 aa hypothetical protein | |||
| 21490 | HrgA protein | |||
| 21495 | R | Sen12420ORF4204P (99% identity) | Cpo92TORF21495P | |
| 21500 | cell surface composition regulator GlgS | |||
| plasmid pHN21SC92-2 | ||||
| 26920 | DNA-binding protein | |||
| 26925 | M | M.Ssp15303ORFEP (95% identity) | M.Cpo92TORF26925P | |
| 26930 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pHN21SC92-2 | ||||
| 26545 | mobilization protein MobX | |||
| 26550 | R | SspS13ORF650P (100% identity) | Cpo92TORF26555P | |
| 26555 | M | M.SspS13ORF650P (100% identity) | M.Cpo92TORF26555P | |
| 26560 | 67 aa hypothetical protein | |||