Neisseria gonorrhoeae CT532 |
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Putative Neisseria gonorrhoeae CT532 RM systems
Ref: Nokchan,N. et al. unpublished
REBASE ref # 34661
Complete sequence: 2,165,075 bp
GenBank #: CP048250
REBASE acronym: NgoCT532
Org_num: 59413
All begin GYN05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2045 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2050 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoCT532ORF2050P |
| 2055 | DNA damage-inducible protein D | |||
| ??? | S | S.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | S.NgoCT532ORF2050P |
| 2070 | R | Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | NgoCT532ORF2050P |
| 2075 | ATP-dependent Clp protease ATP-binding subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoCT532ORF35P |
| 40 | DNA adenine methylase | |||
| 40 | DNA adenine methylase | |||
| 45 | M | M.Ngos1291ORF5755P (100% identity) | GATC | M.NgoCT532ORF45P |
| 50 | 184 aa hypothetical protein | |||
| 1520 | phenylalanine--tRNA ligase subunit alpha | |||
| 1525 | V | V.NgoWSORF391P (100% identity) | V.NgoCT532ORF1530P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.NgoCT532ORF1530P |
| 1540 | R | NgoWSORF391P (100% identity) | CCGG | NgoCT532ORF1530P |
| 1545 | phenylalanine--tRNA ligase subunit beta | |||
| 1815 | SAM-dependent DNA methyltransferase | |||
| 1820 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.NgoCT532ORF1820P |
| 1825 | 140 aa hypothetical protein | |||
| 1845 | uroporphyrinogen decarboxylase | |||
| 1850 | H | H.NgoNG250ORF1950P (100% identity) | H.NgoCT532ORF1860P | |
| 1855 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoCT532ORF1860P |
| 1860 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoCT532ORF1860P |
| 1865 | DNA repair protein RadA | |||
| 3350 | 3-isopropylmalate dehydrogenase | |||
| 3355 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoCT532ORF3360P |
| 3360 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoCT532ORF3360P |
| 3365 | 3-isopropylmalate dehydratase small subunit | |||
| 4280 | anthranilate synthase component I | |||
| 4285 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoCT532ORF4285P |
| 4290 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoCT532ORF4285P |
| 4295 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5610 | replication initiation factor | |||
| 5615 | V | V.Ngos1291ORF65P (100% identity) | V.NgoCT532ORF5625P | |
| 5620 | R | Ngos1291ORF65P (100% identity) | CCGG | NgoCT532ORF5625P |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoCT532ORF5625P | |
| 5635 | type IV pilin protein | |||
| 5810 | excinuclease ABC subunit UvrA | |||
| ??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoCT532ORF5820P |
| 5820 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoCT532ORF5820P |
| 5825 | transposase | |||
| 8975 | FUSC family protein | |||
| 8980 | R | NgoSH240ORFKP (100% identity) | GGCC | NgoCT532ORF8985P |
| 8985 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoCT532ORF8985P |
| 8990 | ribosome recycling factor | |||
| 9500 | 93 aa hypothetical protein | |||
| 9505 | R | NgoWSIIIP (100% identity) | GGTGA | NgoCT532ORF9510P |
| 9510 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoCT532ORF9510P |
| 9515 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoCT532ORF9510P |
| 9520 | RNA-binding transcriptional accessory protein | |||
| 10065 | GTPase ObgE | |||
| 10070 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.NgoCT532ORF10070P |
| 10075 | R | NgoNG250ORF10820P (100% identity) | RGCGCY | NgoCT532ORF10070P |
| 10080 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2730 | peptidyl-prolyl cis-trans isomerase | |||
| 2735 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoCT532ORF2735P |
| 2740 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoCT532ORF2735P |
| 2745 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3180 | alpha-hydroxy-acid oxidizing protein | |||
| 3185 | R | NgoWSORF749P (100% identity) | NgoCT532ORF3190P | |
| ??? | M | M.Nme22822ORF1620P (91% identity) | M.NgoCT532ORF3190P | |
| 3200 | tRNA pseudouridine(55) synthase TruB | |||