Neisseria gonorrhoeae CT530 |
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Putative Neisseria gonorrhoeae CT530 RM systems
Ref: Nokchan,N. et al. unpublished
REBASE ref # 34661
Complete sequence: 2,169,323 bp
GenBank #: CP048254
REBASE acronym: NgoCT530
Org_num: 59412
All begin GYN04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2060 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2065 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoCT530ORF2065P |
| 2070 | DNA damage-inducible protein D | |||
| 2075 | S | S.NgoWNII (100% identity) | GCANNNNNNNGTC | S.NgoCT530ORF2065P |
| 2080 | R | NgoWNIIP (100% identity) | GCANNNNNNNGTC | NgoCT530ORF2065P |
| 2085 | ATP-dependent Clp protease ATP-binding subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoCT530ORF35P |
| 40 | DNA adenine methylase | |||
| 40 | DNA adenine methylase | |||
| ??? | M | M.NgoWPORF8P (100% identity) | GATC | M.NgoCT530ORF45P |
| 55 | 184 aa hypothetical protein | |||
| 1535 | phenylalanine--tRNA ligase subunit alpha | |||
| 1540 | V | V.NgoWSORF391P (100% identity) | V.NgoCT530ORF1545P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.NgoCT530ORF1545P |
| 1555 | R | Npo18661ORFHP (100% identity) | CCGG | NgoCT530ORF1545P |
| 1560 | phenylalanine--tRNA ligase subunit beta | |||
| 1830 | SAM-dependent DNA methyltransferase | |||
| 1835 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoCT530ORF1835P |
| 1840 | 140 aa hypothetical protein | |||
| 1860 | uroporphyrinogen decarboxylase | |||
| 1865 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoCT530ORF1875P | |
| 1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoCT530ORF1875P |
| 1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoCT530ORF1875P |
| 1880 | DNA repair protein RadA | |||
| 3370 | 3-isopropylmalate dehydrogenase | |||
| 3375 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoCT530ORF3380P |
| 3380 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoCT530ORF3380P |
| 3385 | 3-isopropylmalate dehydratase small subunit | |||
| 4300 | anthranilate synthase component I | |||
| 4305 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoCT530ORF4305P |
| 4310 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoCT530ORF4305P |
| 4315 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5630 | replication initiation factor | |||
| 5635 | V | V.Ngos1291ORF65P (100% identity) | V.NgoCT530ORF5645P | |
| 5640 | R | Ngos1291ORF65P (100% identity) | CCGG | NgoCT530ORF5645P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.NgoCT530ORF5645P |
| 5655 | type IV pilin protein | |||
| 5830 | excinuclease ABC subunit UvrA | |||
| ??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoCT530ORF5840P |
| 5840 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoCT530ORF5840P |
| 5845 | transposase | |||
| 9005 | FUSC family protein | |||
| 9010 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoCT530ORF9015P |
| 9015 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoCT530ORF9015P |
| 9020 | ribosome recycling factor | |||
| 9525 | sodium/glutamate symporter | |||
| 9530 | R | NgoPID18ORF1848P (100% identity) | GGTGA | NgoCT530ORF9535P |
| 9535 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoCT530ORF9535P |
| 9540 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoCT530ORF9535P |
| 9545 | RNA-binding transcriptional accessory protein | |||
| 10095 | GTPase ObgE | |||
| 10100 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoCT530ORF10100P |
| 10105 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoCT530ORF10100P |
| 10110 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2740 | peptidyl-prolyl cis-trans isomerase | |||
| 2745 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoCT530ORF2745P |
| 2750 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoCT530ORF2745P |
| 2755 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3190 | alpha-hydroxy-acid oxidizing protein | |||
| 3195 | R | NgoCT602ORF3210P (100% identity) | NgoCT530ORF3200P | |
| ??? | M | M.NgoSW0032ORF3245P (80% identity) | M.NgoCT530ORF3200P | |
| 3210 | tRNA pseudouridine(55) synthase TruB | |||