Pectobacterium quasiaquaticum A398-S21-F17 |
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Putative Pectobacterium quasiaquaticum A398-S21-F17 RM systems
Ref: Ben Moussa,H. et al. Int J Syst Evol Microbiol 71 (10) (2021)
REBASE ref # 34629
Complete sequence: 4,321,692 bp
GenBank #: CP065178
REBASE acronym: PquF17
Org_num: 59294
All begin IG605_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7210 | 157 aa hypothetical protein | |||
| 7215 | M | M.PquJ17DndEP (100% identity) | M.PquF17DndEP | |
| 7220 | DNA sulfur modification protein DndD | |||
| 7215 | DNA sulfur modification protein DndE | |||
| 7220 | M | M.PquJ17DndDP (100% identity) | M.PquF17DndDP | |
| 7225 | DNA phosphorothioation system sulfurtransferase | |||
| 7220 | DNA sulfur modification protein DndD | |||
| 7225 | M | M.PquJ17DndCP (100% identity) | M.PquF17DndCP | |
| 7230 | DNA sulfur modification protein DndB | |||
| 7225 | DNA phosphorothioation system sulfurtransferase | |||
| 7230 | M | M.PquJ17DndBP (100% identity) | M.PquF17DndBP | |
| 7235 | cysteine desulfurase DndA | |||
| 7230 | DNA sulfur modification protein DndB | |||
| 7235 | M | M.PquJ17DndAP (100% identity) | M.PquF17DndAP | |
| 7240 | transcriptional regulator | |||
| 18805 | AAA family ATPase | |||
| 18810 | M | M.Pca32ORF1440P (100% identity) | M.PquF17ORF18810P | |
| 18815 | helix-turn-helix domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15040 | IS5 family transposase | |||
| 15045 | M | M.SspSXG1ORFAP (63% identity) | M.PquF17ORF15045P | |
| 15050 | R | PcaPC1ORF851P (98% identity) | PquF17ORF15045P | |
| 15055 | DEAD/DEAH box helicase family protein | |||
| 15050 | DEAD/DEAH box helicase family protein | |||
| 15055 | R | PpeF16ORFDP (95% identity) | PquF17ORF15060P | |
| 15060 | M | M.Dni1119ORF2140P (66% identity) | M.PquF17ORF15060P | |
| 15065 | site-specific integrase | |||