Dinoroseobacter shibae DFL-36 |
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Putative Dinoroseobacter shibae DFL-36 RM systems
Ref: Koppenhoefer,S. et al. unpublished
REBASE ref # 34636
Complete sequence: 3,796,095 bp
GenBank #: CP097547
REBASE acronym: Dsh36
Org_num: 59318
All begin M8007_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9920 | 243 aa hypothetical protein | |||
| 9925 | M | M1.Dsh12II (92% identity) | M1.Dsh36ORF9925P | |
| 9930 | M | M2.Dsh112351ORF9925P (89% identity) | GACGGC | M2.Dsh36ORF9925P |
| 9935 | DUF3883 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10870 | site-specific integrase | |||
| 10875 | R | Dsh12ORF2102P (100% identity) | Dsh36ORF10880P | |
| 10880 | M | M.Dsh112351ORF10880BP (100% identity) | M.Dsh36ORF10880BP | |
| 10885 | IS3-like element ISDsh2 family transposase | |||
| 10890 | M | M.Dsh12ORF2102BP (100% identity) | M.Dsh36ORF10880AP | |
| 10895 | C | C.Dsh12ORF2102P (100% identity) | C.Dsh36ORF10880P | |
| 10900 | 241 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5150 | phospholipase D family protein | |||
| 5155 | R | Dsh112351ORF5155P (100% identity) | Dsh36ORF5155P | |
| 5160 | 55 aa hypothetical protein | |||