Pseudomonas species BYT-5 |
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Putative Pseudomonas species BYT-5 RM systems
Ref: Liu,Y. unpublished
REBASE ref # 25506
| Sequence length: | GenBank #: | |
| Chromosome: | 5,423,027 bp | CP097489 |
| plasmid pBYT5-1: | 301,296 bp | CP097490 |
REBASE acronym: PspBYT5
Org_num: 59297
All begin M6G63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19415 | mCpol domain-containing protein | |||
| 19420 | M | M.PspBYT1ORF20085P (100% identity) | M.PspBYT5ORF19420P | |
| 19425 | S | S.PspBYT1ORF20085P (95% identity) | S.PspBYT5ORF19420P | |
| 19430 | virulence protein RhuM/Fic/DOC family protein | |||
| 19435 | R | PspBYT1ORF20085P (100% identity) | PspBYT5ORF19420P | |
| 19440 | C | C.PspBYT1ORF20085P (100% identity) | C.PspBYT5ORF19420P | |
| 19445 | 196 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10150 | SNF2-related protein | |||
| 10155 | RM | PspBYT1ORF10125P (100% identity) | PspBYT5ORF10155P | |
| 10160 | 547 aa hypothetical protein | |||
| 14470 | 92 aa hypothetical protein | |||
| 14475 | M | M.PspBYT1ORF15165P (100% identity) | M.PspBYT5ORF14475P | |
| 14480 | DUF3850 domain-containing protein | |||
| plasmid pBYT5-1 | ||||
| 25690 | recombination-associated protein RdgC | |||
| 25695 | M | M.SrhKC1ORFHP (71% identity) | M.PspBYT5ORF25695P | |
| 25700 | ISL3-like element IS1411 family transposase | |||
| 26060 | 8-oxoguanine DNA glycosylase | |||
| 26065 | M | M.PspBYT1ORF27195P (100% identity) | M.PspBYT5ORF26065P | |
| 26070 | transposase domain-containing protein | |||
| 26750 | 105 aa hypothetical protein | |||
| 26755 | M | M.PspC5ORF15885P (100% identity) | M.PspBYT5ORF26755P | |
| 26760 | 113 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24600 | nucleotide-binding protein | |||
| 24605 | R | PspMR02ORF8785P (100% identity) | PspBYT5ORF24610P | |
| 24610 | M | M.PspMR02ORF8785P (50% identity) | M.PspBYT5ORF24610BP | |
| 24615 | IS3 family transposase | |||
| 24620 | M | M.PspMR02ORF8785P (38% identity) | M.PspBYT5ORF24610AP | |
| 24625 | abortive infection family protein | |||
| plasmid pBYT5-1 | ||||
| 25725 | abortive infection family protein | |||
| 25730 | M | M.PspMR02ORF8785P (75% identity) | M.PspBYT5ORF25730AP | |
| 25735 | IS30-like element ISPsp8 family transposase | |||
| 25740 | M | M.PspMR02ORF8785P (25% identity) | M.PspBYT5ORF25730BP | |
| 25745 | R | PspMR02ORF8785P (100% identity) | PspBYT5ORF25730P | |
| 25750 | nucleotide-binding protein | |||