Neisseria gonorrhoeae 351961 |
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Putative Neisseria gonorrhoeae 351961 RM systems
Ref: Gomez,O.M. et al. unpublished
REBASE ref # 34642
Complete sequence: 2,242,106 bp
GenBank #: CP097460
REBASE acronym: Ngo351961
Org_num: 59342
All begin M3Y01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2340 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2345 | M | M.NgoWSII (100% identity) | M.Ngo351961ORF2345P | |
| 2350 | DNA damage-inducible protein D | |||
| 2355 | S | S1.NgoCT602ORF2070P (99% identity) | GCANNNNNNNNTGC | S1.Ngo351961ORF2345P |
| 2360 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo351961ORF2345P |
| 2365 | R | NgoWNIIP (100% identity) | Ngo351961ORF2345P | |
| 2370 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3740 | replication-associated recombination protein A | |||
| 3745 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | Ngo351961ORF3770P |
| 3750 | hydroxyacid dehydrogenase | |||
| 3755 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo351961ORF3770P |
| 3760 | 186 aa hypothetical protein | |||
| 3765 | 279 aa hypothetical protein | |||
| 3770 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo351961ORF3770P |
| 3775 | bifunctional | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo351961ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| 40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo351961ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1810 | phenylalanine--tRNA ligase subunit alpha | |||
| 1815 | V | V.NgoWSORF391P (100% identity) | V.Ngo351961ORF1820P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo351961ORF1820P |
| 1830 | R | NgoWSORF391P (100% identity) | CCGG | Ngo351961ORF1820P |
| 1835 | phenylalanine--tRNA ligase subunit beta | |||
| 2105 | N-6 DNA methylase | |||
| 2110 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo351961ORF2110P |
| 2115 | 140 aa hypothetical protein | |||
| 2135 | uroporphyrinogen decarboxylase | |||
| 2140 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo351961ORF2150P | |
| 2145 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo351961ORF2150P |
| 2150 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo351961ORF2150P |
| 2155 | DNA repair protein RadA | |||
| 3630 | 3-isopropylmalate dehydrogenase | |||
| 3635 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo351961ORF3640P |
| 3640 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo351961ORF3640P |
| 3645 | 3-isopropylmalate dehydratase small subunit | |||
| 4915 | anthranilate synthase component I | |||
| 4920 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo351961ORF4920P |
| 4925 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo351961ORF4920P |
| 4930 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 7910 | replication initiation factor domain-containing | |||
| 7915 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo351961ORF7930P | |
| ??? | R | Ngos1291ORF65P (100% identity) | CCGG | Ngo351961ORF7930P |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo351961ORF7930P | |
| 7940 | 48 aa hypothetical protein | |||
| 8990 | cysteine--tRNA ligase | |||
| 8995 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo351961ORF9000P |
| 9000 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo351961ORF9000P |
| 9005 | GTPase ObgE | |||
| 9460 | RNA-binding transcriptional accessory protein | |||
| 9465 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo351961ORF9465P |
| 9470 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo351961ORF9465P |
| 9475 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo351961ORF9465P |
| 9480 | 93 aa hypothetical protein | |||
| 10045 | ribosome recycling factor | |||
| 10050 | M | M.NgoWPORF2222P (98% identity) | GGCC | M.Ngo351961ORF10050P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo351961ORF10050P |
| 10065 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2980 | peptidylprolyl isomerase | |||
| 2985 | M | M.NgoSH240ORFNP (100% identity) | CCACC | M.Ngo351961ORF2985P |
| 2990 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo351961ORF2985P |
| 2995 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3445 | alpha-hydroxy-acid oxidizing protein | |||
| 3450 | R | NgoWPORF742P (100% identity) | Ngo351961ORF3455P | |
| 3455 | M | M.NgoWNIV (79% identity) | M.Ngo351961ORF3455BP | |
| 3460 | M | M.NgoSW0015ORF3255P (22% identity) | M.Ngo351961ORF3455AP | |
| 3465 | tRNA pseudouridine(55) synthase TruB | |||