Neisseria gonorrhoeae 942021 |
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Putative Neisseria gonorrhoeae 942021 RM systems
Ref: Gomez,O.M. et al. unpublished
REBASE ref # 34642
Complete sequence: 2,177,753 bp
GenBank #: CP097458
REBASE acronym: Ngo942021
Org_num: 59344
All begin M3T54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2340 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2345 | M | M.NgoSH240ORFMP (100% identity) | GCANNNNNNGTC | M.Ngo942021ORF2345P |
| 2350 | DNA damage-inducible protein D | |||
| 2355 | S | S.NgoWMII (100% identity) | GCANNNNNNGTC | S.Ngo942021ORF2345P |
| 2360 | R | NgoWNIIP (100% identity) | GCANNNNNNGTC | Ngo942021ORF2345P |
| 2365 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3770 | replication-associated recombination protein A | |||
| 3775 | R | NgoWLIP (99% identity) | GAGNNNNNTAC | Ngo942021ORF3800P |
| 3780 | hydroxyacid dehydrogenase | |||
| 3785 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo942021ORF3800P |
| 3790 | 186 aa hypothetical protein | |||
| 3795 | 279 aa hypothetical protein | |||
| 3800 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo942021ORF3800P |
| 3805 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo942021ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| 40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo942021ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1815 | phenylalanine--tRNA ligase subunit alpha | |||
| 1820 | V | V.NgoWSORF391P (100% identity) | V.Ngo942021ORF1825P | |
| ??? | M | M.NgoMORF446P (100% identity) | M.Ngo942021ORF1825P | |
| 1835 | R | Npo18661ORFHP (100% identity) | CCGG | Ngo942021ORF1825P |
| 1840 | phenylalanine--tRNA ligase subunit beta | |||
| 2110 | N-6 DNA methylase | |||
| 2115 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo942021ORF2115P |
| 2120 | 140 aa hypothetical protein | |||
| 2140 | uroporphyrinogen decarboxylase | |||
| 2145 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo942021ORF2155P | |
| 2150 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo942021ORF2155P |
| 2155 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo942021ORF2155P |
| 2160 | DNA repair protein RadA | |||
| 3665 | 3-isopropylmalate dehydrogenase | |||
| 3670 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo942021ORF3675P |
| 3675 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo942021ORF3675P |
| 3680 | 3-isopropylmalate dehydratase small subunit | |||
| 4655 | anthranilate synthase component I | |||
| 4660 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo942021ORF4660P |
| 4665 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo942021ORF4660P |
| 4670 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 7690 | replication initiation factor domain-containing | |||
| 7695 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo942021ORF7710P | |
| ??? | R | Ngos1291ORF65P (100% identity) | CCGG | Ngo942021ORF7710P |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo942021ORF7710P | |
| 7720 | 48 aa hypothetical protein | |||
| 8840 | cysteine--tRNA ligase | |||
| 8845 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo942021ORF8850P |
| 8850 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo942021ORF8850P |
| 8855 | GTPase ObgE | |||
| 9350 | RNA-binding transcriptional accessory protein | |||
| 9355 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo942021ORF9355P |
| 9360 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo942021ORF9355P |
| 9365 | R | NgoCT602ORF9520P (100% identity) | GGTGA | Ngo942021ORF9355P |
| 9370 | IS5/IS1182 family transposase | |||
| 9900 | ribosome recycling factor | |||
| 9905 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo942021ORF9905P |
| 9910 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo942021ORF9905P |
| 9915 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3015 | peptidylprolyl isomerase | |||
| 3020 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo942021ORF3020P | |
| 3025 | R | Ngos1291ORF8455P (100% identity) | Ngo942021ORF3020P | |
| 3030 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3485 | alpha-hydroxy-acid oxidizing protein | |||
| 3490 | R | NgoCT602ORF3210P (100% identity) | GCAGA | Ngo942021ORF3495P |
| ??? | M | M.NgoJH7ORFKP (100% identity) | GCAGA | M.Ngo942021ORF3495P |
| 3505 | tRNA pseudouridine(55) synthase TruB | |||