Neisseria gonorrhoeae 652 |
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Putative Neisseria gonorrhoeae 652 RM systems
Ref: Gomez,O.M. et al. unpublished
REBASE ref # 34642
Complete sequence: 2,174,453 bp
GenBank #: CP097459
REBASE acronym: Ngo652
Org_num: 59343
All begin M3Y02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2330 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2335 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.Ngo652ORF2335P |
| 2340 | DNA damage-inducible protein D | |||
| 2345 | S | S.NgoWNII (100% identity) | GCANNNNNNNGTC | S.Ngo652ORF2335P |
| 2350 | R | NgoWNIIP (100% identity) | GCANNNNNNNGTC | Ngo652ORF2335P |
| 2355 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3695 | replication-associated recombination protein A | |||
| 3700 | R | NgoWLIP (99% identity) | GAGNNNNNTAC | Ngo652ORF3725P |
| 3705 | hydroxyacid dehydrogenase | |||
| 3710 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo652ORF3725P |
| 3715 | 186 aa hypothetical protein | |||
| 3720 | 279 aa hypothetical protein | |||
| 3725 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo652ORF3725P |
| 3730 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo652ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| 40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo652ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1805 | phenylalanine--tRNA ligase subunit alpha | |||
| 1810 | V | V.NgoWSORF391P (100% identity) | V.Ngo652ORF1815P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo652ORF1815P |
| 1825 | R | Npo18661ORFHP (100% identity) | CCGG | Ngo652ORF1815P |
| 1830 | phenylalanine--tRNA ligase subunit beta | |||
| 2095 | IS1595 family transposase | |||
| 2100 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo652ORF2100P |
| 2105 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo652ORF2100P |
| 2110 | 140 aa hypothetical protein | |||
| 2130 | uroporphyrinogen decarboxylase | |||
| 2135 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo652ORF2145P | |
| 2140 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo652ORF2145P |
| 2145 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo652ORF2145P |
| 2150 | DNA repair protein RadA | |||
| 3590 | 3-isopropylmalate dehydrogenase | |||
| 3595 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo652ORF3600P |
| 3600 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo652ORF3600P |
| 3605 | 3-isopropylmalate dehydratase small subunit | |||
| 4580 | anthranilate synthase component I | |||
| 4585 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo652ORF4585P |
| 4590 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo652ORF4585P |
| 4595 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 7595 | V | V.Ngos1291ORF65P (90% identity) | V.Ngo652ORF7610P | |
| ??? | R | Ngos1291ORF65P (100% identity) | CCGG | Ngo652ORF7610P |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo652ORF7610P | |
| 7620 | 48 aa hypothetical protein | |||
| 8740 | cysteine--tRNA ligase | |||
| 8745 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo652ORF8750P |
| 8750 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.Ngo652ORF8750P |
| 8755 | GTPase ObgE | |||
| 9250 | RNA-binding transcriptional accessory protein | |||
| 9255 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo652ORF9255P |
| 9260 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo652ORF9255P |
| 9265 | R | NgoPID18ORF1848P (100% identity) | GGTGA | Ngo652ORF9255P |
| 9270 | IS5/IS1182 family transposase | |||
| 9780 | ribosome recycling factor | |||
| 9785 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo652ORF9785P |
| 9790 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo652ORF9785P |
| 9795 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2950 | peptidylprolyl isomerase | |||
| 2955 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo652ORF2955P | |
| 2960 | R | Ngos1291ORF8455P (100% identity) | Ngo652ORF2955P | |
| 2965 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3410 | alpha-hydroxy-acid oxidizing protein | |||
| 3415 | R | NgoCT602ORF3210P (100% identity) | GCAGA | Ngo652ORF3420P |
| 3420 | M | M.NgoJH1ORFAP (100% identity) | GCAGA | M.Ngo652ORF3420P |
| 3425 | tRNA pseudouridine(55) synthase TruB | |||