Klebsiella pneumoniae isolate 1962 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae isolate 1962 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 5,402,226 bp | OW969789 |
| plasmid P1: | 148,814 bp | OW969790 |
| plasmid P3: | 39,797 bp | OW969792 |
REBASE acronym: Kpn1962
Org_num: 59334
All begin AI3055V1_, AI3055V1_REPA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 4477 | S | S.KpnLEMB18ORF18410P (100% identity) | AACNNNNNNGTRC | S.Kpn1962ORF4478P |
| 4478 | M | M.KpnLEMB18ORF18410P (100% identity) | AACNNNNNNGTRC | M.Kpn1962ORF4478P |
| 4479 | R | Kpn067ORF23420P (100% identity) | AACNNNNNNGTRC | Kpn1962ORF4478P |
| 4480 | Prophage integrase IntA | |||
| plasmid P1 | ||||
| 47 | IS1 family transposase | |||
| 5162 | M | M.SmaQC11ORF51970P (100% identity) | M.Kpn1962ORF5162P | |
| 5163 | S | S.Eco1506ORF9180P (59% identity) | S.Kpn1962ORF5162P | |
| 5164 | 227 aa hypothetical protein | |||
| 5165 | 594 aa hypothetical protein | |||
| 5166 | R | Kpn80319ORFDP (98% identity) | Kpn1962ORF5162P | |
| 5167 | 251 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 346 | Cell division protein DamX | |||
| 347 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn1962DamP |
| 348 | Ribulose-phosphate 3-epimerase | |||
| 1734 | 322 aa hypothetical protein | |||
| 1735 | M | M.Kpn392qORF3047P (99% identity) | M.Kpn1962ORF1735P | |
| 1736 | Crossover junction endodeoxyribonuclease RusA | |||
| 1775 | 235 aa hypothetical protein | |||
| 1776 | M | M.KpnPORF8810P (99% identity) | CCWGG | M.Kpn1962ORF1776P |
| 1777 | V | V.Ksp2N3ORFEP (75% identity) | V.Kpn1962ORF1776P | |
| 1778 | inner membrane transporter YedA | |||
| 3377 | 804 aa hypothetical protein | |||
| 3378 | M | M.Ecor134ORF15975P (97% identity) | GATC | M.Kpn1962ORF3378P |
| 3379 | 75 aa hypothetical protein | |||
| 3809 | 74 aa hypothetical protein | |||
| 3810 | M | M.Ksp4251ORF15240P (96% identity) | M.Kpn1962ORF3810P | |
| 3811 | 161 aa hypothetical protein | |||
| 3825 | 101 aa hypothetical protein | |||
| 3826 | M | M.KoxSA2ORFAP (98% identity) | M1.Kpn1962ORF3826P | |
| 3827 | M | M2.KpnT147ORF15390P (96% identity) | M2.Kpn1962ORF3826P | |
| 3828 | 73 aa hypothetical protein | |||
| 4458 | Beta-xylosidase | |||
| 4459 | R | KpnS902ORFAP (100% identity) | Kpn1962ORF4459P | |
| 4460 | 224 aa hypothetical protein | |||
| plasmid P3 | ||||
| 5294 | 190 aa hypothetical protein | |||
| 5295 | R | Sma31ORF25925P (96% identity) | CTCGAG | Kpn1962ORF5295P |
| 5296 | 82 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 8 | IS3 family transposase | |||
| 4474 | R | Ksp4251MrrP (100% identity) | Kpn1962MrrP | |
| 4475 | 1095 aa hypothetical protein | |||