Xanthomonas campestris pv. nigromaculans NCPPB 1935 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas campestris pv. nigromaculans NCPPB 1935 RM systems
Ref: Pothier,F.J. unpublished
REBASE ref # 31060
Complete sequence: 5,136,383 bp
GenBank #: OW568917
REBASE acronym: Xca1935
Org_num: 58886
All begin NCPPB1935_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6565 | IS3 family transposase | |||
| 6570 | S | S.Ppu352ORF25460P (31% identity) | S2.Xca1935ORF6585P | |
| 6575 | IS30 family transposase | |||
| 6580 | S | S.PspAK22ORF20585P (40% identity) | S1.Xca1935ORF6585P | |
| 6585 | M | M.Ppu352ORF25460P (87% identity) | M.Xca1935ORF6585P | |
| 6595 | 98 aa hypothetical protein | |||
| 11860 | HTH-17 domain-containing protein | |||
| 11865 | R | Pch7ORF11835P (86% identity) | Xca1935ORF11865P | |
| 11870 | ISxcC1 transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3405 | 276 aa hypothetical protein | |||
| 3410 | M | M.Xho498ORF720P (100% identity) | M.Xca1935ORF3410P | |
| 3415 | V | V.XhoVT106ORF3340P (100% identity) | V.Xca1935ORF3410P | |
| 3420 | Y1-Tnp domain-containing protein | |||
| 6145 | MPT synthase subunit 2 | |||
| 6155 | M | M1.XbaORF3845P (95% identity) | M1.Xca1935ORF6155P | |
| 6160 | M | M2.Xci2DORF5475P (97% identity) | M2.Xca1935ORF6155P | |
| 6165 | RM | Xci2DORF5475P (96% identity) | Xca1935ORF6155P | |
| 6170 | 224 aa hypothetical protein | |||
| 14765 | Phage-related capsid packaging protein | |||
| 14770 | M | M.Xga8129ORF16450P (100% identity) | M.Xca1935ORF14770P | |
| 14775 | 283 aa hypothetical protein | |||
| 19830 | Site-specific DNA-methyltransferase | |||
| 19835 | RM | Xga8129ORF39260P (96% identity) | Xca1935ORF19835P | |
| 19840 | 107 aa hypothetical protein | |||