Enterobacter cloacae isolate 114 |
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Putative Enterobacter cloacae isolate 114 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 4,788,084 bp | OW967388 |
| chromosome main: | 4,793,544 bp | OW968296 |
| chromosome main: | 4,797,313 bp | OW849483 |
| chromosome main: | 4,801,035 bp | OW969670 |
| chromosome main: | 4,766,042 bp | OW969715 |
| plasmid P1: | 213,001 bp | OW967389 |
| plasmid P1: | 297,896 bp | OW968297 |
| plasmid P1: | 305,034 bp | OW849484 |
| plasmid P1: | 306,668 bp | OW969716 |
REBASE acronym: Ecl114
Org_num: 58436
All begin AI2624V1_, AI2759V1_, AI2759V1_REPA, AI2915V1_, AI2924V1_, AI2924V1_REPA, AI2972V1_, AI2972V1_REPA
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 502 | 867 aa hypothetical protein | |||
| 503 | RM | Esp193ORF935BP (100% identity) | AGGAAG | RM1.Ecl114aORF503P |
| 504 | 1000 aa hypothetical protein | |||
| 505 | 174 aa hypothetical protein | |||
| 506 | RM | Esp193ORF935AP (100% identity) | AGGAAG | RM2.Ecl114aORF503P |
| 507 | 584 aa hypothetical protein | |||
| 536 | 335 aa hypothetical protein | |||
| ??? | R | EspMGH3ORFDP (100% identity) | Ecl114aORF537P | |
| 540 | Endoribonuclease SymE | |||
| 980 | DNA base-flipping protein | |||
| 981 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114aORF981P |
| 982 | 83 aa hypothetical protein | |||
| 2796 | inner membrane transporter YedA | |||
| 2797 | V | V.Esp193DcmP (100% identity) | V.Ecl114aDcmP | |
| 2798 | M | M.ExiPC4LDcmP (98% identity) | CCWGG | M.Ecl114aDcmP |
| 2799 | 233 aa hypothetical protein | |||
| chromosome main | ||||
| 502 | 867 aa hypothetical protein | |||
| 503 | RM | Esp193ORF935BP (100% identity) | AGGAAG | Ecl114cORF503BP |
| 504 | 1000 aa hypothetical protein | |||
| 505 | 174 aa hypothetical protein | |||
| 506 | RM | Esp193ORF935AP (100% identity) | AGGAAG | Ecl114cORF503AP |
| 507 | 584 aa hypothetical protein | |||
| 536 | 335 aa hypothetical protein | |||
| ??? | R | EspMGH3ORFDP (100% identity) | Ecl114cORF537P | |
| 540 | Endoribonuclease SymE | |||
| 974 | DNA base-flipping protein | |||
| 975 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114cORF975P |
| 976 | 83 aa hypothetical protein | |||
| 2669 | 175 aa hypothetical protein | |||
| 2670 | M | M2.Esp193ORF13605P (100% identity) | M.Ecl114cORF2670P | |
| 2671 | 241 aa hypothetical protein | |||
| 2853 | inner membrane transporter YedA | |||
| 2854 | V | V.Esp193DcmP (100% identity) | V.Ecl114cDcmP | |
| 2855 | M | M.ExiPC4LDcmP (98% identity) | CCWGG | M.Ecl114cDcmP |
| 2856 | 233 aa hypothetical protein | |||
| 4064 | Ribulose-phosphate 3-epimerase | |||
| 4065 | M | M.ExiPC4LDamP (100% identity) | GATC | M.Ecl114cDamP |
| 4066 | Cell division protein DamX | |||
| chromosome main | ||||
| 504 | 867 aa hypothetical protein | |||
| 505 | RM | Esp193ORF935BP (100% identity) | AGGAAG | Ecl114ORF505P |
| 506 | 1000 aa hypothetical protein | |||
| 507 | 174 aa hypothetical protein | |||
| 508 | RM | Esp193ORF935AP (100% identity) | AGGAAG | Ecl114ORF508P |
| 509 | 584 aa hypothetical protein | |||
| 976 | DNA base-flipping protein | |||
| 977 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114ORF977P |
| 978 | 83 aa hypothetical protein | |||
| 2673 | 175 aa hypothetical protein | |||
| 2674 | M | M2.Esp193ORF13605P (100% identity) | M.Ecl114ORF2674P | |
| 2675 | 241 aa hypothetical protein | |||
| 2859 | inner membrane transporter YedA | |||
| 2860 | V | V.Esp193DcmP (100% identity) | V.Ecl114DcmP | |
| 2861 | M | M.ExiPC4LDcmP (98% identity) | CCWGG | M.Ecl114DcmP |
| 2862 | 233 aa hypothetical protein | |||
| 4072 | Ribulose-phosphate 3-epimerase | |||
| 4073 | M | M.ExiPC4LDamP (100% identity) | GATC | M.Ecl114DamP |
| 4074 | Cell division protein DamX | |||
| chromosome main | ||||
| 504 | 867 aa hypothetical protein | |||
| 505 | RM | Esp193ORF935BP (100% identity) | AGGAAG | Ecl114dORF505BP |
| 506 | 1000 aa hypothetical protein | |||
| 507 | 174 aa hypothetical protein | |||
| 508 | RM | Esp193ORF935AP (100% identity) | AGGAAG | Ecl114dORF505AP |
| 509 | 584 aa hypothetical protein | |||
| 538 | 335 aa hypothetical protein | |||
| ??? | R | EspMGH3ORFDP (100% identity) | Ecl114dORF539P | |
| 542 | Endoribonuclease SymE | |||
| 976 | DNA base-flipping protein | |||
| 977 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114dORF977P |
| 978 | 83 aa hypothetical protein | |||
| 2682 | 175 aa hypothetical protein | |||
| 2683 | M | M2.Esp193ORF13605P (100% identity) | M.Ecl114dORF2683P | |
| 2684 | 241 aa hypothetical protein | |||
| 2866 | inner membrane transporter YedA | |||
| 2867 | V | V.Esp193DcmP (100% identity) | V.Ecl114dDcmP | |
| 2868 | M | M.ExiPC4LDcmP (98% identity) | CCWGG | M.Ecl114dDcmP |
| 2869 | 233 aa hypothetical protein | |||
| 4078 | Ribulose-phosphate 3-epimerase | |||
| 4079 | M | M.ExiPC4LDamP (100% identity) | GATC | M.Ecl114dDamP |
| 4080 | Cell division protein DamX | |||
| chromosome main | ||||
| 502 | 867 aa hypothetical protein | |||
| 503 | RM | Esp193ORF935BP (100% identity) | AGGAAG | Ecl114bORF503BP |
| 504 | 1000 aa hypothetical protein | |||
| 505 | 174 aa hypothetical protein | |||
| 506 | RM | Esp193ORF935AP (100% identity) | AGGAAG | Ecl114bORF503AP |
| 507 | 584 aa hypothetical protein | |||
| 536 | 335 aa hypothetical protein | |||
| ??? | R | EspMGH3ORFDP (100% identity) | Ecl114bORF537P | |
| 540 | Endoribonuclease SymE | |||
| 974 | DNA base-flipping protein | |||
| 975 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114bORF975P |
| 976 | 83 aa hypothetical protein | |||
| 2678 | 175 aa hypothetical protein | |||
| 2679 | M | M2.Esp193ORF13605P (100% identity) | M.Ecl114bORF2679P | |
| 2680 | 241 aa hypothetical protein | |||
| 4034 | Ribulose-phosphate 3-epimerase | |||
| 4035 | M | M.ExiPC4LDamP (100% identity) | GATC | M.Ecl114bDamP |
| 4036 | Cell division protein DamX | |||
| plasmid P1 | ||||
| 4650 | 106 aa hypothetical protein | |||
| 4651 | M | M.Ssp15303ORFDP (100% identity) | M.Ecl114aORF4651P | |
| 4652 | Polyamine aminopropyltransferase | |||
| 4677 | 387 aa hypothetical protein | |||
| 4678 | M | M.Ssp15303ORFEP (95% identity) | M.Ecl114aORF4678P | |
| 4679 | 283 aa hypothetical protein | |||
| plasmid P1 | ||||
| 45 | pseudogene | |||
| 4608 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecl114cORF4608P |
| 4609 | R | YpsR1ORFAP (100% identity) | CCWGG | Ecl114cORF4608P |
| 64 | 293 aa hypothetical protein CJD35_20465 | |||
| 4662 | 55 aa hypothetical protein | |||
| 4663 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ecl114cORF4663P |
| 4664 | Endonuclease YhcR | |||
| 4761 | 106 aa hypothetical protein | |||
| 4762 | M | M.Ssp15303ORFDP (100% identity) | M.Ecl114cORF4762P | |
| 4763 | Polyamine aminopropyltransferase | |||
| 4788 | 387 aa hypothetical protein | |||
| 4789 | M | M.Ssp15303ORFEP (95% identity) | M.Ecl114cORF4789P | |
| 4790 | 283 aa hypothetical protein | |||
| plasmid P1 | ||||
| 84 | 293 aa hypothetical protein CJD35_20465 | |||
| 4573 | R | YpsR1ORFAP (100% identity) | CCWGG | Ecl114ORF4574P |
| 4574 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecl114ORF4574P |
| 65 | pseudogene | |||
| 4679 | 55 aa hypothetical protein | |||
| 4680 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ecl114ORF4680P |
| 4681 | Endonuclease YhcR | |||
| 4778 | 106 aa hypothetical protein | |||
| 4779 | M | M.Ssp15303ORFDP (100% identity) | M.Ecl114ORF4779P | |
| 4780 | Polyamine aminopropyltransferase | |||
| 4805 | 387 aa hypothetical protein | |||
| 4806 | M | M.Ssp15303ORFEP (95% identity) | M.Ecl114ORF4806P | |
| 4807 | 283 aa hypothetical protein | |||
| plasmid P1 | ||||
| 52 | pseudogene | |||
| 4581 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecl114bORF4581P |
| 4582 | R | YpsR1ORFAP (100% identity) | CCWGG | Ecl114bORF4581P |
| 71 | 293 aa hypothetical protein CJD35_20465 | |||
| 4641 | 55 aa hypothetical protein | |||
| 4642 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ecl114bORF4642P |
| 4643 | Endonuclease YhcR | |||
| 4767 | 387 aa hypothetical protein | |||
| 4768 | M | M.Ssp15303ORFEP (95% identity) | M.Ecl114bORF4768P | |
| 4769 | 283 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 546 | Melibiose carrier protein | |||
| 547 | R | EspMGH3McrCP (100% identity) | Ecl114aMcrCP | |
| 548 | R | EspMGH3McrBP (100% identity) | Ecl114aMcrBP | |
| 549 | Arylesterase | |||
| chromosome main | ||||
| 548 | Melibiose carrier protein | |||
| 549 | R | EspMGH3McrCP (100% identity) | Ecl114McrCP | |
| 550 | R | EspMGH3McrBP (100% identity) | Ecl114McrBP | |
| 551 | Arylesterase | |||
| chromosome main | ||||
| 546 | Melibiose carrier protein | |||
| 547 | R | EspMGH3McrCP (100% identity) | Ecl114bMcrCP | |
| 548 | R | EspMGH3McrBP (100% identity) | Ecl114bMcrBP | |
| 549 | Arylesterase | |||