Ref: Alioto,T. et al. unpublished

REBASE ref # 33419

Sequence length:GenBank #:
chromosome main: 5,441,256 bp OW959919
chromosome main: 5,400,154 bp OW970444
chromosome main: 5,411,034 bp OW967889
chromosome main: 5,424,342 bp OW970374
chromosome main: 5,489,253 bp OW969812
chromosome main: 5,489,277 bp OW969805
chromosome main: 5,462,732 bp OW849330
plasmid P1: 110,140 bp OW969813
plasmid P1: 215,903 bp OW970375
plasmid P1: 117,271 bp OW959920
plasmid P1: 119,298 bp OW970445
plasmid P1: 121,126 bp OW970387
plasmid P1: 181,140 bp OW849331
plasmid P1: 110,622 bp OW969806
plasmid P1: 121,256 bp OW967890
plasmid P2: 91,304 bp OW969814
plasmid P2: 112,360 bp OW959921
plasmid P2: 96,925 bp OW970446
plasmid P2: 91,795 bp OW970388
plasmid P2: 41,949 bp OW970376
plasmid P2: 117,913 bp OW967891
plasmid P2: 91,304 bp OW969807
plasmid P3: 53,236 bp OW969815
plasmid P3: 53,243 bp OW959922
plasmid P3: 38,201 bp OW970447
plasmid P3: 53,236 bp OW969808
plasmid P4: 39,199 bp OW969816
plasmid P4: 37,802 bp OW970390
plasmid P4: 39,216 bp OW969809

REBASE acronym: Kpni101

Org_num: 58560

 

All begin AI2771V2_, AI2771V2_REPA, AI2801V1_, AI2801V1_REPA, AI2880V1_, AI2880V1_REPA, AI2898V1_, AI2898V1_REPA, AI3007V1_, AI3007V1_REPA, AI3008V1_, AI3008V1_REPA, AI3044V1_, AI3044V1_REPA, AI3049V1_, AI3049V1_REPA

Type I
ORF Gene Most similar Specificity Name
 
chromosome main
 
4457 83 aa hypothetical protein
4458 M M.KpnY516ORF19290P (100% identity) M.Kpn101gORF4458P
4459 S S.KpnY516ORF19290P (100% identity) S.Kpn101gORF4458P
4460 Type-1 restriction enzyme R protein
 
chromosome main
 
1494 Anaerobic glycerol-3-phosphate dehydrogenase
1495 M M.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG M.Kpn101bORF1495P
1496 S S.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG S.Kpn101bORF1495P
1497 R Sen42919ORF11180P (100% identity) ACGNNNNNNCTG Kpn101bORF1495P
1498 422 aa hypothetical protein
 
4479 83 aa hypothetical protein
4480 M M.KpnY516ORF19290P (100% identity) M.Kpn101bORF4480P
4481 S S.KpnY516ORF19290P (100% identity) S.Kpn101bORF4480P
4482 Type-1 restriction enzyme R protein
 
plasmid P1
 
5082 576 aa hypothetical protein
5083 M M.Kpni147adORF4939P (100% identity) M.Kpn101fORF5083P
5084 1005 aa hypothetical protein
 
plasmid P1
 
5031 576 aa hypothetical protein
5032 M M.Kpni147adORF4939P (100% identity) M.Kpn101gORF5032P
5033 1005 aa hypothetical protein
 
plasmid P1
 
5241 576 aa hypothetical protein
5242 M M.Kpni147adORF4939P (100% identity) M.Kpn101bORF5242P
5243 1005 aa hypothetical protein
 
plasmid P1
 
5055 422 aa hypothetical protein
5056 R Sen42919ORF11180P (100% identity) ACGNNNNNNCTG Kpn101aORF5058P
5057 S S.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG S.Kpn101aORF5058P
5058 M M.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG M.Kpn101aORF5058P
5059 57 aa hypothetical protein
 
plasmid P2
 
5252 76 aa hypothetical protein
5253 M M.Ror23ORF29040P (100% identity) M.Kpn101cORF5253P
5254 S S.Ror23ORF29040P (100% identity) S.Kpn101cORF5253P
5255 R KvaT2ORF29845P (100% identity) Kpn101cORF5253P
5256 422 aa hypothetical protein
 
plasmid P2
 
5153 576 aa hypothetical protein
5154 M M.Kpni147adORF4939P (100% identity) M.Kpn101aORF5154P
5155 1005 aa hypothetical protein
 
plasmid P2
 
5277 57 aa hypothetical protein
5278 M M.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG M.Kpn101bORF1495P
5279 S S.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG S.Kpn101bORF1495P
5280 R Sen42919ORF11180P (100% identity) ACGNNNNNNCTG Kpn101bORF1495P
5281 422 aa hypothetical protein
 
5293 576 aa hypothetical protein
5294 M M.Kpni147adORF4939P (100% identity) M.Kpn101bORF5242P
5295 1005 aa hypothetical protein
 
plasmid P2
 
5253 76 aa hypothetical protein
5254 M M.Ror23ORF29040P (100% identity) M.Kpn101eORF5254P
5255 S S.Ror23ORF29040P (100% identity) S.Kpn101eORF5254P
5256 R KvaT2ORF29845P (100% identity) Kpn101eORF5254P
5257 422 aa hypothetical protein
 
plasmid P3
 
5253 57 aa hypothetical protein
5254 M M.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG M.Kpn101gORF5254P
5255 S S.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG S.Kpn101gORF5254P
5256 R Sen42919ORF11180P (100% identity) ACGNNNNNNCTG Kpn101gORF5254P
5257 422 aa hypothetical protein
 
plasmid P4
 
5309 57 aa hypothetical protein
5310 M M.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG M.Kpn101fORF5310P
5311 S S.Sen42919ORF11180P (100% identity) ACGNNNNNNCTG S.Kpn101fORF5310P
5312 R Sen42919ORF11180P (100% identity) ACGNNNNNNCTG Kpn101fORF5310P
5313 422 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
chromosome main
 
343 Cell division protein DamX
344 M M.KspC31DamP (100% identity) GATC M.Kpn101dDamP
345 Ribulose-phosphate 3-epimerase
 
1789 322 aa hypothetical protein
1790 M M.Kpni101ORF1838P (100% identity) GATC M.Kpn101dORF1790P
1791 Crossover junction endodeoxyribonuclease RusA
 
1831 235 aa hypothetical protein
1832 M M.KpnvKPORF8710P (97% identity) CCWGG M.Kpn101dORF1832P
1833 V V.Kpni101ORF1880P (100% identity) V.Kpn101dORF1832P
1834 inner membrane transporter YedA
 
1863 64 aa hypothetical protein
1864 M M1.Kpni101ORF1912P (100% identity) M1.Kpn101dORF1864P
1865 57 aa hypothetical protein
1866 51 aa hypothetical protein
1867 M M2.Kpni101ORF1912P (100% identity) M2.Kpn101dORF1864P
1868 864 aa hypothetical protein
 
3871 52 aa hypothetical protein
3872 M M.Kpni101ORF3888P (100% identity) M.Kpn101dORF3872P
3873 389 aa hypothetical protein
 
3872 175 aa hypothetical protein
3873 M M.Kpni101ORF3889P (100% identity) M.Kpn101dORF3873P
3874 90 aa hypothetical protein
 
chromosome main
 
347 Cell division protein DamX
348 M M.KspC31DamP (100% identity) GATC M.Kpn101gDamP
349 Ribulose-phosphate 3-epimerase
 
1232 Serine/threonine-protein phosphatase 1
1233 M M.Kpni101ORF1235P (100% identity) GATC M.Kpn101gORF1233P
1234 168 aa hypothetical protein
 
1762 322 aa hypothetical protein
1763 M M.Kpni101ORF1838P (100% identity) GATC M.Kpn101gORF1763P
1764 Crossover junction endodeoxyribonuclease RusA
 
1804 235 aa hypothetical protein
1805 M M.KpnvKPORF8710P (97% identity) CCWGG M.Kpn101gORF1805P
1806 V V.Kpni101ORF1880P (100% identity) V.Kpn101gORF1805P
1807 inner membrane transporter YedA
 
1836 64 aa hypothetical protein
1837 M M1.Kpni101ORF1912P (100% identity) M1.Kpn101gORF1837P
1838 57 aa hypothetical protein
1839 51 aa hypothetical protein
1840 M M2.Kpni101ORF1912P (100% identity) M2.Kpn101gORF1837P
1841 864 aa hypothetical protein
 
3813 101 aa hypothetical protein
3814 M M1.KpnRUM35ORF15395P (100% identity) GATC M1.Kpn101gORF3814P
3815 M M2.KpnRUM35ORF15395P (100% identity) GATC M2.Kpn101gORF3814P
3816 90 aa hypothetical protein
 
chromosome main
 
348 Cell division protein DamX
349 M M.KspC31DamP (100% identity) GATC M.Kpn101aDamP
350 Ribulose-phosphate 3-epimerase
 
1232 Serine/threonine-protein phosphatase 1
1233 M M.Kpni101ORF1235P (100% identity) GATC M.Kpn101aORF1233P
1234 168 aa hypothetical protein
 
1770 322 aa hypothetical protein
1771 M M.Kpni101ORF1838P (100% identity) GATC M.Kpn101aORF1771P
1772 Crossover junction endodeoxyribonuclease RusA
 
1812 235 aa hypothetical protein
1813 M M.KpnvKPORF8710P (97% identity) CCWGG M.Kpn101aORF1813P
1814 V V.Kpni101ORF1880P (100% identity) V.Kpn101aORF1813P
1815 inner membrane transporter YedA
 
1844 64 aa hypothetical protein
1845 M M1.Kpni101ORF1912P (100% identity) M1.Kpn101aORF1845P
1846 57 aa hypothetical protein
1847 51 aa hypothetical protein
1848 M M2.Kpni101ORF1912P (100% identity) M2.Kpn101aORF1845P
1849 864 aa hypothetical protein
 
3821 101 aa hypothetical protein
3822 M M1.KpnRUM35ORF15395P (100% identity) GATC M1.Kpn101aORF3822P
3823 M M2.KpnRUM35ORF15395P (100% identity) GATC M2.Kpn101aORF3822P
3824 90 aa hypothetical protein
 
chromosome main
 
349 Cell division protein DamX
350 M M.KspC31DamP (100% identity) GATC M.Kpn101bDamP
351 Ribulose-phosphate 3-epimerase
 
1234 Serine/threonine-protein phosphatase 1
1235 M M.Kpni101ORF1235P (100% identity) GATC M.Kpn101bORF1235P
1236 168 aa hypothetical protein
 
1782 322 aa hypothetical protein
1783 M M.Kpni101ORF1838P (100% identity) GATC M.Kpn101bORF1783P
1784 Crossover junction endodeoxyribonuclease RusA
 
1824 235 aa hypothetical protein
1825 M M.KpnvKPORF8710P (97% identity) CCWGG M.Kpn101bORF1825P
1826 V V.Kpni101ORF1880P (100% identity) V.Kpn101bORF1825P
1827 inner membrane transporter YedA
 
1856 64 aa hypothetical protein
1857 M M1.Kpni101ORF1912P (100% identity) M1.Kpn101bORF1857P
1858 57 aa hypothetical protein
1859 51 aa hypothetical protein
1860 M M2.Kpni101ORF1912P (100% identity) M2.Kpn101bORF1857P
1861 864 aa hypothetical protein
 
3835 101 aa hypothetical protein
3836 M M1.KpnRUM35ORF15395P (100% identity) GATC M1.Kpn101bORF3836P
3837 M M2.KpnRUM35ORF15395P (100% identity) GATC M2.Kpn101bORF3836P
3838 90 aa hypothetical protein
 
chromosome main
 
343 Cell division protein DamX
344 M M.KspC31DamP (100% identity) GATC M.Kpn101eDamP
345 Ribulose-phosphate 3-epimerase
 
1112 75 aa hypothetical protein
1113 M M.KpnRUM35ORF27675P (100% identity) GATC M.Kpn101eORF1113P
1114 804 aa hypothetical protein
 
1813 322 aa hypothetical protein
1814 M M.Kpni101ORF1838P (100% identity) GATC M.Kpn101eORF1814P
1815 Crossover junction endodeoxyribonuclease RusA
 
1855 235 aa hypothetical protein
1856 M M.KpnvKPORF8710P (97% identity) CCWGG M.Kpn101eORF1856P
1857 V V.Kpni101ORF1880P (100% identity) V.Kpn101eORF1856P
1858 inner membrane transporter YedA
 
1887 64 aa hypothetical protein
1888 M M1.Kpni101ORF1912P (100% identity) M1.Kpn101eORF1888P
1889 57 aa hypothetical protein
1890 51 aa hypothetical protein
1891 M M2.Kpni101ORF1912P (100% identity) M2.Kpn101eORF1888P
1892 864 aa hypothetical protein
 
3920 142 aa hypothetical protein
3921 M M.Kqu14AORF10295P (100% identity) M1.Kpn101eORF3921P
3922 M M2.Kpn6733ORF23600P (100% identity) M2.Kpn101eORF3921P
3923 72 aa hypothetical protein
 
chromosome main
 
343 Cell division protein DamX
344 M M.KspC31DamP (100% identity) GATC M.Kpn101cDamP
345 Ribulose-phosphate 3-epimerase
 
1112 75 aa hypothetical protein
1113 M M.KpnRUM35ORF27675P (100% identity) GATC M.Kpn101cORF1113P
1114 804 aa hypothetical protein
 
1812 322 aa hypothetical protein
1813 M M.Kpni101ORF1838P (100% identity) GATC M.Kpn101cORF1813P
1814 Crossover junction endodeoxyribonuclease RusA
 
1854 235 aa hypothetical protein
1855 M M.KpnvKPORF8710P (97% identity) CCWGG M.Kpn101cORF1855P
1856 V V.Kpni101ORF1880P (100% identity) V.Kpn101cORF1855P
1857 inner membrane transporter YedA
 
1886 64 aa hypothetical protein
1887 M M1.Kpni101ORF1912P (100% identity) M1.Kpn101cORF1887P
1888 57 aa hypothetical protein
1889 51 aa hypothetical protein
1890 M M2.Kpni101ORF1912P (100% identity) M2.Kpn101cORF1887P
1891 864 aa hypothetical protein
 
3919 142 aa hypothetical protein
3920 M M.Kqu14AORF10295P (100% identity) M1.Kpn101cORF3920P
3921 M M2.Kpn6733ORF23600P (100% identity) M2.Kpn101cORF3920P
3922 72 aa hypothetical protein
 
chromosome main
 
1234 Serine/threonine-protein phosphatase 1
1235 M M.KpnRUM35ORF1750P (100% identity) GATC M.Kpni101ORF1235P
1236 168 aa hypothetical protein
 
1527 85 aa hypothetical protein
1528 M M.Ror218ORF7565P (100% identity) M.Kpni101ORF1528P
1529 575 aa hypothetical protein
 
1528 294 aa hypothetical protein
1529 M M.KvaCHCORF26640P (100% identity) M.Kpni101ORF1529P
1530 353 aa hypothetical protein
 
1532 63 aa hypothetical protein
1533 M M.KpnCRE5bORF12365P (100% identity) M.Kpni101ORF1533P
1534 136 aa hypothetical protein
 
1837 322 aa hypothetical protein
1838 M M.KpnRUM35ORF4630P (100% identity) GATC M.Kpni101ORF1838P
1839 Crossover junction endodeoxyribonuclease RusA
 
1879 235 aa hypothetical protein
1880 M M.KpnvKPORF8710P (97% identity) CCWGG M.Kpni101ORF1880P
1881 V V.KpnRDcmP (100% identity) V.Kpni101ORF1880P
1882 inner membrane transporter YedA
 
1911 64 aa hypothetical protein
1912 M M1.Kpn101gORF1837P (100% identity) M1.Kpni101ORF1912P
1913 57 aa hypothetical protein
1914 51 aa hypothetical protein
1915 M M2.KpnM1693ORFAP (90% identity) M2.Kpni101ORF1912P
1916 864 aa hypothetical protein
 
3887 52 aa hypothetical protein
3888 M M.Kpn101dORF3872P (100% identity) M.Kpni101ORF3888P
3889 389 aa hypothetical protein
 
3888 175 aa hypothetical protein
3889 M M.Kpn101dORF3873P (100% identity) M.Kpni101ORF3889P
3890 90 aa hypothetical protein
 
plasmid P1
 
5138 88 aa hypothetical protein
5139 M M.YpsR2ORFAP (100% identity) CCWGG M.Kpn101cORF5139P
5140 R YpsR1ORFAP (99% identity) CCWGG R1.Kpn101cORF5139P
75 293 aa hypothetical protein CJD35_20465
 
5202 297 aa hypothetical protein
5203 M M.SmaKC004ORF48960P (100% identity) GTAC M.Kpn101cORF5203P
5204 Replication initiation protein
 
plasmid P1
 
5180 76 aa hypothetical protein
5181 M M.SmaQC11ORF52800P (100% identity) M.Kpn101bORF5181P
5182 73 aa hypothetical protein
 
89 293 aa hypothetical protein CJD35_20465
5260 R YpsR1ORFAP (99% identity) CCWGG Kpn101bORF5261P
5261 M M.YpsR2ORFAP (100% identity) CCWGG M.Kpn101bORF5261P
86 IS1 family transposase
 
plasmid P1
 
61 transposase
5148 M M.YpsR2ORFAP (100% identity) CCWGG M.Kpn101dORF5210P
5149 R YpsR2ORFAP (100% identity) CCWGG Kpn101dORF5210P
63 293 aa hypothetical protein CJD35_20465
 
plasmid P1
 
95 293 aa hypothetical protein CJD35_20465
5106 R YpsR1ORFAP (99% identity) CCWGG Kpn101fORF5107P
5107 M M.YpsR2ORFAP (99% identity) CCWGG M.Kpn101fORF5107P
93 IS1 family transposase
 
plasmid P1
 
88 293 aa hypothetical protein CJD35_20465
5242 R YpsR1ORFAP (99% identity) CCWGG Kpni101ORF5243P
5243 M M.YpsR2ORFAP (100% identity) CCWGG M.Kpni101ORF5243P
85 transposase
 
plasmid P1
 
5139 88 aa hypothetical protein
5140 M M.YpsR2ORFAP (100% identity) CCWGG M.Kpn101eORF5140P
5141 R YpsR1ORFAP (99% identity) CCWGG R1.Kpn101eORF5140P
75 293 aa hypothetical protein CJD35_20465
 
5203 297 aa hypothetical protein
5204 M M.SmaKC004ORF48960P (100% identity) GTAC M.Kpn101eORF5204P
5205 Replication initiation protein
 
plasmid P1
 
5068 76 aa hypothetical protein
5069 M M.SmaQC11ORF52800P (100% identity) M.Kpn101aORF5069P
5070 73 aa hypothetical protein
 
plasmid P2
 
69 293 aa hypothetical protein CJD35_20465
5236 R YpsR1ORFAP (99% identity) CCWGG Kpn101gORF5237P
5237 M M.YpsR2ORFAP (100% identity) CCWGG M.Kpn101gORF5237P
67 IS1 family transposase
 
plasmid P2
 
5215 73 aa hypothetical protein
5216 M M.SmaBWH35ORF25885P (100% identity) M.Kpn101fORF5216P
5217 76 aa hypothetical protein
 
plasmid P2
 
5208 DNA-invertase hin
5209 R YpsR2ORFAP (100% identity) CCWGG Kpn101dORF5210P
5210 M M.YpsR2ORFAP (100% identity) CCWGG M.Kpn101dORF5210P
101 transposase
 
plasmid P2
 
85 293 aa hypothetical protein CJD35_20465
5172 R YpsR1ORFAP (99% identity) CCWGG Kpn101aORF5173P
5173 M M.YpsR2ORFAP (100% identity) CCWGG M.Kpn101aORF5173P
83 IntI1
 
5223 76 aa hypothetical protein
5224 M M.SmaQC11ORF52800P (100% identity) M.Kpn101aORF5224P
5225 73 aa hypothetical protein
 
plasmid P2
 
5257 422 aa hypothetical protein
5258 M M.SmaQC11ORF52800P (100% identity) M.Kpn101eORF5258P
5259 73 aa hypothetical protein
 
plasmid P2
 
5256 422 aa hypothetical protein
5257 M M.SmaQC11ORF52800P (100% identity) M.Kpn101cORF5257P
5258 73 aa hypothetical protein
 
plasmid P3
 
5338 103 aa hypothetical protein
5339 M M.Kva120EORF27280P (100% identity) M.Kpn101eORF5339P
5340 76 aa hypothetical protein
 
plasmid P3
 
5349 76 aa hypothetical protein
5350 M M.Kpnst65ORF12385P (100% identity) M.Kpn101dORF5350P
5351 103 aa hypothetical protein
 
plasmid P3
 
5283 73 aa hypothetical protein
5284 M M.SmaBWH35ORF25885P (100% identity) M.Kpn101gORF5284P
5285 76 aa hypothetical protein
 
plasmid P3
 
5359 103 aa hypothetical protein
5360 M M.Kva120EORF27280P (100% identity) M.Kpn101cORF5360P
5361 76 aa hypothetical protein
 
plasmid P4
 
5420 190 aa hypothetical protein
5421 R Sma31ORF25925P (96% identity) CTCGAG Kpn101eORF5421P
5422 82 aa hypothetical protein
 
plasmid P4
 
5418 190 aa hypothetical protein
5419 R Sma31ORF25925P (96% identity) CTCGAG Kpn101cORF5419P
5420 82 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
chromosome main
 
1772 566 aa hypothetical protein
1773 R Kpni101ORF1822P (100% identity) Kpn101dORF1774P
1774 M M.Kpni101ORF1822P (100% identity) M.Kpn101dORF1774P
1775 462 aa hypothetical protein
 
chromosome main
 
1820 566 aa hypothetical protein
1821 R Kpn33875ORF810P (100% identity) Kpni101ORF1822P
1822 M M.Kpn33875ORF810P (100% identity) M.Kpni101ORF1822P
1823 462 aa hypothetical protein
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