Klebsiella pneumoniae isolate 326 |
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Putative Klebsiella pneumoniae isolate 326 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 5,445,481 bp | OW849289 |
| chromosome main: | 5,263,462 bp | OW849350 |
| chromosome main: | 5,323,918 bp | OW995946 |
| chromosome main: | 5,448,387 bp | OW849451 |
| chromosome main: | 5,364,299 bp | OW969755 |
| plasmid P2: | 66,509 bp | OW849352 |
| plasmid P2: | 83,793 bp | OW969757 |
| plasmid P3: | 56,855 bp | OW849292 |
| plasmid P3: | 53,249 bp | OW849454 |
| plasmid P5: | 4,867 bp | OW849456 |
| plasmid P6: | 4,867 bp | OW849295 |
REBASE acronym:
Org_num:
All begin AI2675V1_, AI2675V1_REPA, AI2681V1_, AI2681V1_REPA, AI2686V1_, AI2686V1_REPA, AI2952V1_, AI2952V1_REPA, AI3036V1_, AI3036V1_REPA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 637 | 615 aa hypothetical protein | |||
| 638 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpn326ORF640P |
| 639 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpn326ORF640P |
| 640 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpn326ORF640P |
| 641 | 190 aa hypothetical protein | |||
| ??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn326ORF4392P |
| 4392 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn326ORF4392P |
| 4393 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn326ORF4392P |
| 4394 | Prophage integrase IntA | |||
| chromosome main | ||||
| 636 | 615 aa hypothetical protein | |||
| 637 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpn326bORF639P |
| 638 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpn326bORF639P |
| 639 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpn326bORF639P |
| 640 | 190 aa hypothetical protein | |||
| ??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn326bORF4269P |
| 4269 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn326bORF4269P |
| 4270 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn326bORF4269P |
| 4271 | Prophage integrase IntA | |||
| chromosome main | ||||
| 648 | 615 aa hypothetical protein | |||
| 649 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpni326eORF651P |
| 650 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpni326eORF651P |
| 651 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpni326eORF651P |
| 652 | 190 aa hypothetical protein | |||
| ??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpni326eORF4326P |
| 4326 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpni326eORF4326P |
| 4327 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpni326eORF4326P |
| 4328 | Prophage integrase IntA | |||
| chromosome main | ||||
| 637 | 615 aa hypothetical protein | |||
| 638 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpn326aORF640P |
| 639 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpn326aORF640P |
| 640 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpn326aORF640P |
| 641 | 190 aa hypothetical protein | |||
| ??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn326aORF4396P |
| 4396 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn326aORF4396P |
| 4397 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn326aORF4396P |
| 4398 | Prophage integrase IntA | |||
| chromosome main | ||||
| 637 | 615 aa hypothetical protein | |||
| 638 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpn326cORF640P |
| 639 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpn326cORF640P |
| 640 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpn326cORF640P |
| 641 | 190 aa hypothetical protein | |||
| ??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn326cORF4357P |
| 4357 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn326cORF4357P |
| 4358 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn326cORF4357P |
| 4359 | Prophage integrase IntA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 344 | Cell division protein DamX | |||
| 345 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn326DamP |
| 346 | Ribulose-phosphate 3-epimerase | |||
| 1652 | 235 aa hypothetical protein | |||
| 1653 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpn326DcmP |
| 1654 | V | V.KspC31DcmP (75% identity) | V.Kpn326DcmP | |
| 1655 | inner membrane transporter YedA | |||
| 2907 | 662 aa hypothetical protein | |||
| 2908 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn326ORF2908P |
| 2909 | 75 aa hypothetical protein | |||
| 3126 | 76 aa hypothetical protein | |||
| 3127 | M | M.Kpni326eORF3134P (100% identity) | M.Kpn326ORF3127P | |
| 3128 | 44 aa hypothetical protein | |||
| 4243 | 890 aa hypothetical protein | |||
| 4244 | RM | Kpn326aORF4248BP (100% identity) | Kpn326ORF4244BP | |
| 32 | unnamed protein product | |||
| 6 | pseudogene | |||
| 4245 | 276 aa hypothetical protein | |||
| 35 | pseudogene | |||
| 4246 | 87 aa hypothetical protein | |||
| 4247 | RM | Kpn326aORF4248AP (100% identity) | Kpn326ORF4244AP | |
| 4248 | 587 aa hypothetical protein | |||
| 4612 | HTH-type transcriptional regulator RamB | |||
| 4613 | M | M.KquSNI47ORF46740P (100% identity) | M.Kpn326ORF4613P | |
| 4614 | 121 aa hypothetical protein | |||
| chromosome main | ||||
| 343 | Cell division protein DamX | |||
| 344 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn326bDamP |
| 345 | Ribulose-phosphate 3-epimerase | |||
| 1650 | 235 aa hypothetical protein | |||
| 1651 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpn326bDcmP |
| 1652 | V | V.KspC31DcmP (75% identity) | V.Kpn326bDcmP | |
| 1653 | inner membrane transporter YedA | |||
| 2904 | 715 aa hypothetical protein | |||
| 2905 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn326bORF2905P |
| 2906 | 75 aa hypothetical protein | |||
| 3123 | 76 aa hypothetical protein | |||
| 3124 | M | M.Kpni326eORF3134P (100% identity) | M.Kpn326bORF3124P | |
| 3125 | 44 aa hypothetical protein | |||
| chromosome main | ||||
| 355 | Cell division protein DamX | |||
| 356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni326eDamP |
| 357 | Ribulose-phosphate 3-epimerase | |||
| 1657 | 235 aa hypothetical protein | |||
| 1658 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpni326eDcmP |
| 1659 | V | V.KspC31DcmP (75% identity) | V.Kpni326eDcmP | |
| 1660 | inner membrane transporter YedA | |||
| 2914 | 715 aa hypothetical protein | |||
| 2915 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpni326eORF2915P |
| 2916 | 75 aa hypothetical protein | |||
| 3133 | 76 aa hypothetical protein | |||
| 3134 | M | M.KpnS1329ORF4115P (100% identity) | M.Kpni326eORF3134P | |
| 3135 | 44 aa hypothetical protein | |||
| chromosome main | ||||
| 344 | Cell division protein DamX | |||
| 345 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn326aDamP |
| 346 | Ribulose-phosphate 3-epimerase | |||
| 1652 | 235 aa hypothetical protein | |||
| 1653 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpn326aDcmP |
| 1654 | V | V.KspC31DcmP (75% identity) | V.Kpn326aDcmP | |
| 1655 | inner membrane transporter YedA | |||
| 2907 | 715 aa hypothetical protein | |||
| 2908 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn326aORF2908P |
| 2909 | 75 aa hypothetical protein | |||
| 3128 | 76 aa hypothetical protein | |||
| 3129 | M | M.KvaN56ORF17165P (100% identity) | M.Kpn326aORF3129P | |
| 3130 | 44 aa hypothetical protein | |||
| 4247 | 890 aa hypothetical protein | |||
| 4248 | RM | Kpn326ORF4244BP (100% identity) | Kpn326aORF4248BP | |
| 37 | unnamed protein product | |||
| 7 | pseudogene | |||
| 4249 | 276 aa hypothetical protein | |||
| 40 | pseudogene | |||
| 4250 | 87 aa hypothetical protein | |||
| 4251 | RM | Kpn326ORF4244AP (100% identity) | Kpn326aORF4248AP | |
| 4252 | 587 aa hypothetical protein | |||
| 4616 | HTH-type transcriptional regulator RamB | |||
| 4617 | M | M.KquSNI47ORF46740P (100% identity) | M.Kpn326aORF4617P | |
| 4618 | 121 aa hypothetical protein | |||
| chromosome main | ||||
| 1648 | 235 aa hypothetical protein | |||
| 1649 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpn326cDcmP |
| 1650 | V | V.KspC31DcmP (75% identity) | V.Kpn326cDcmP | |
| 1651 | inner membrane transporter YedA | |||
| 2901 | 662 aa hypothetical protein | |||
| 2902 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn326cORF2902P |
| 2903 | 75 aa hypothetical protein | |||
| 3120 | 76 aa hypothetical protein | |||
| 3121 | M | M.Kpni326eORF3134P (100% identity) | M.Kpn326cORF3121P | |
| 3122 | 44 aa hypothetical protein | |||
| 4620 | 121 aa hypothetical protein | |||
| 4621 | M | M.KquSNI47ORF46740P (100% identity) | M.Kpn326cORF4621P | |
| 4622 | HTH-type transcriptional regulator RamB | |||
| plasmid P2 | ||||
| 166 | 293 aa hypothetical protein CJD35_20465 | |||
| 5107 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn326bORF5108P |
| 5108 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn326bORF5108P |
| 5109 | 88 aa hypothetical protein | |||
| plasmid P2 | ||||
| 189 | 147 aa hypothetical protein SK90_05319, partial | |||
| 5206 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn326cORF5207P |
| 5207 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn326cORF5207P |
| 5208 | 88 aa hypothetical protein | |||
| plasmid P3 | ||||
| 133 | 293 aa hypothetical protein CJD35_20465 | |||
| 5346 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn326ORF5347P |
| 5347 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn326ORF5347P |
| 5348 | 88 aa hypothetical protein | |||
| plasmid P3 | ||||
| 135 | 293 aa hypothetical protein CJD35_20465 | |||
| 5346 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn326aORF5347P |
| 5347 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn326aORF5347P |
| 5348 | 88 aa hypothetical protein | |||
| plasmid P5 | ||||
| 5367 | 71 aa hypothetical protein | |||
| 5368 | M | M.Kpn326ORF5370P (100% identity) | M.Kpn326aORF5368P | |
| ??? | R | Sen71968ORF23930P (100% identity) | Kpn326aORF5368P | |
| plasmid P6 | ||||
| 5370 | M | M.Kpn326aORF5368P (100% identity) | M.Kpn326ORF5370P | |
| 5371 | 71 aa hypothetical protein | |||
| 5372 | 161 aa hypothetical protein | |||
| 5373 | Mobilization protein MbeC | |||
| ??? | R | Sen71968ORF23930P (100% identity) | Kpn326ORF5370P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 12 | IS3 family transposase | |||
| 4319 | R | Ksp4251MrrP (100% identity) | Kpni326eMrrP | |
| 4320 | 904 aa hypothetical protein | |||