Citrobacter freundii isolate 18 |
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Putative Citrobacter freundii isolate 18 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 4,961,487 bp | OW849256 |
| chromosome main: | 4,964,029 bp | OW849208 |
| plasmid P1: | 287,088 bp | OW849209 |
| plasmid P1: | 290,966 bp | OW849257 |
| plasmid P2: | 142,948 bp | OW849210 |
| plasmid P2: | 110,089 bp | OW849258 |
| plasmid P3: | 87,686 bp | OW849259 |
| plasmid P3: | 110,089 bp | OW849211 |
REBASE acronym: Cfr18
Org_num: 58408
All begin AI2666V1_, AI2668V1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 2226 | type I restriction enzymeP M protein | |||
| 2227 | R | CfrGORF11545P (100% identity) | Cfr18ORF2227P | |
| 2228 | LexA repressor | |||
| 4038 | Mrr restriction system protein | |||
| 4039 | R | Cfr18ORF4037P (100% identity) | Cfr18ORF4040P | |
| 4040 | M | M.CfrGORF20560P (100% identity) | M.Cfr18ORF4040P | |
| 4041 | S | S.CfrGORF20560P (100% identity) | S.Cfr18ORF4040P | |
| 4042 | Toxic protein SymE | |||
| chromosome main | ||||
| 2228 | type I restriction enzymeP M protein | |||
| 2229 | R | CfrGORF11545P (100% identity) | Cfr18ORF2229P | |
| 2230 | LexA repressor | |||
| 4035 | Mrr restriction system protein | |||
| 4036 | R | Cfr18ORF4040P (100% identity) | Cfr18ORF4037P | |
| 4037 | M | M.CfrGORF20560P (100% identity) | M.Cfr18ORF4037P | |
| 4038 | S | S.CfrGORF20560P (100% identity) | S.Cfr18ORF4037P | |
| 4039 | Toxic protein SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 338 | Cell division protein DamX | |||
| 339 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr18Dam2P |
| 340 | Ribulose-phosphate 3-epimerase | |||
| 1749 | 230 aa hypothetical protein | |||
| 1750 | M | M.CfrHM38III (97% identity) | CCWGG | M.Cfr18ORF1750P |
| 1751 | V | V.CfrL75DcmP (100% identity) | V.Cfr18ORF1750P | |
| 1752 | inner membrane transporter YedA | |||
| 2732 | 40 aa hypothetical protein | |||
| 2733 | M | M.CfrGORF14110P (100% identity) | M.Cfr18ORF2733P | |
| 2734 | 264 aa hypothetical protein | |||
| 2963 | 112 aa hypothetical protein | |||
| 2964 | M | M.Cfr18ORF2967P (100% identity) | M.Cfr18ORF2964P | |
| 2965 | 250 aa hypothetical protein | |||
| 2964 | 658 aa hypothetical protein | |||
| 2965 | M | M1.Cfr18ORF2968P (100% identity) | M1.Cfr18ORF2965P | |
| 2966 | 96 aa hypothetical protein | |||
| 2967 | M | M2.Cfr18ORF2968P (100% identity) | M2.Cfr18ORF2965P | |
| 2968 | 82 aa hypothetical protein | |||
| 3141 | 70 aa hypothetical protein | |||
| 3142 | M | M.CfrGORF15925P (100% identity) | M.Cfr18ORF3142P | |
| 3143 | 109 aa hypothetical protein | |||
| 4073 | 108 aa hypothetical protein | |||
| 4074 | R | Cfr18ORF4077P (100% identity) | Cfr18ORF4074P | |
| 4075 | DNA primase TraC | |||
| chromosome main | ||||
| 338 | Cell division protein DamX | |||
| 339 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr18DamP |
| 340 | Ribulose-phosphate 3-epimerase | |||
| 1746 | 230 aa hypothetical protein | |||
| 1747 | M | M.CfrHM38III (97% identity) | CCWGG | M.Cfr18DcmP |
| 1748 | V | V.CfrL75DcmP (100% identity) | V.Cfr18DcmP | |
| 1749 | inner membrane transporter YedA | |||
| 2735 | 40 aa hypothetical protein | |||
| 2736 | M | M.CfrGORF14110P (100% identity) | M.Cfr18ORF2736P | |
| 2737 | 264 aa hypothetical protein | |||
| 2966 | 112 aa hypothetical protein | |||
| 2967 | M | M.Cfr18ORF2964P (100% identity) | M.Cfr18ORF2967P | |
| 2968 | 250 aa hypothetical protein | |||
| 2967 | 658 aa hypothetical protein | |||
| 2968 | M | M1.Cfr18ORF2965P (100% identity) | M1.Cfr18ORF2968P | |
| 2969 | 96 aa hypothetical protein | |||
| 2970 | M | M2.Cfr18ORF2965P (100% identity) | M2.Cfr18ORF2968P | |
| 2971 | 82 aa hypothetical protein | |||
| 3144 | 70 aa hypothetical protein | |||
| 3145 | M | M.CfrGORF15925P (100% identity) | M.Cfr18ORF3145P | |
| 3146 | 109 aa hypothetical protein | |||
| 4076 | 108 aa hypothetical protein | |||
| 4077 | R | Cfr18ORF4074P (100% identity) | Cfr18ORF4077P | |
| 4078 | DNA primase TraC | |||
| plasmid P1 | ||||
| 4818 | 55 aa hypothetical protein | |||
| 4819 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Cfr18ORF4819P |
| 4820 | Endonuclease YhcR | |||
| 4935 | 106 aa hypothetical protein | |||
| 4936 | M | M.Ssp15303ORFDP (100% identity) | M.Cfr18ORF4936P | |
| 4937 | Polyamine aminopropyltransferase | |||
| 4964 | 387 aa hypothetical protein | |||
| 4965 | M | M.Ssp15303ORFEP (95% identity) | M.Cfr18ORF4965P | |
| 4966 | 284 aa hypothetical protein | |||
| plasmid P1 | ||||
| 4817 | 55 aa hypothetical protein | |||
| 4818 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Cfr18ORF4818P |
| 4819 | Endonuclease YhcR | |||
| 4935 | 106 aa hypothetical protein | |||
| 4936 | M | M.Ssp15303ORFDP (100% identity) | M.Cfr18ORF4936P | |
| 4937 | Polyamine aminopropyltransferase | |||
| 4966 | 387 aa hypothetical protein | |||
| 4967 | M | M.Ssp15303ORFEP (95% identity) | M.Cfr18ORF4967P | |
| 4968 | 284 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5102 | 520 aa hypothetical protein | |||
| 5103 | R | SmaBWH35ORF16650P (100% identity) | CCWGG | Cfr18ORF5104P |
| 5104 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M.Cfr18ORF5104P |
| 5105 | 712 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5080 | 76 aa hypothetical protein | |||
| 5081 | M | M.CfrGORF25495P (100% identity) | M.Cfr18ORF5081P | |
| 5082 | 280 aa hypothetical protein | |||
| plasmid P3 | ||||
| 5172 | 520 aa hypothetical protein | |||
| 5173 | R | SmaBWH35ORF16650P (100% identity) | CCWGG | Cfr18ORF5174P |
| 5174 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M.Cfr18ORF5174P |
| 5175 | 712 aa hypothetical protein | |||
| plasmid P3 | ||||
| 5228 | 76 aa hypothetical protein | |||
| 5229 | M | M.CfrGORF25495P (100% identity) | M.Cfr18ORF5229P | |
| 5230 | 280 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid P2 | ||||
| 5014 | 77 aa hypothetical protein | |||
| 5015 | R | Kqu14AORF27805P (100% identity) | CCGCAG | Cfr18ORF5016P |
| 5016 | M | M.Yenp29930ORFAP (100% identity) | CCGCAG | M.Cfr18ORF5016P |
| 5017 | Transposon Tn3 resolvase | |||