Raoultella ornithinolytica |
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Putative Raoultella ornithinolytica RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 5,527,863 bp | OW849030 |
| plasmid P1: | 228,616 bp | OW849031 |
REBASE acronym: Ror0
Org_num: 58826
All begin AI2711V1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 4419 | 161 aa hypothetical protein | |||
| 4420 | R | Rpl10263IP (100% identity) | CACNNNNNNNATGC | Ror0ORF4421P |
| 4421 | M | M.RorVR1ORF46080P (99% identity) | CACNNNNNNNATGC | M.Ror0ORF4421P |
| 4422 | S | S.RorVR1ORF46080P (100% identity) | CACNNNNNNNATGC | S.Ror0ORF4421P |
| 4423 | Toxic protein SymE | |||
| 4531 | 155 aa hypothetical protein | |||
| 4532 | M | M.KpnNIH49I (100% identity) | TGAYNNNNNCCT | M.Ror0ORF4532P |
| 4533 | S | S.KpnNIH49I (100% identity) | TGAYNNNNNCCT | S.Ror0ORF4532P |
| 4534 | R | KpnW2ORF4764P (100% identity) | TGAYNNNNNCCT | Ror0ORF4532P |
| 4535 | 187 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 377 | Cell division protein DamX | |||
| 378 | M | M.RspXY1DamP (100% identity) | GATC | M.Ror0DamP |
| 379 | Ribulose-phosphate 3-epimerase | |||
| 1712 | 231 aa hypothetical protein | |||
| 1713 | M | M.Rsp2415DcmP (99% identity) | CCWGG | M.Ror0DcmP |
| 1714 | V | V.RspXY1DcmP (98% identity) | V.Ror0DcmP | |
| 1715 | inner membrane transporter YedA | |||
| 2412 | 366 aa hypothetical protein | |||
| 2413 | M | M.Ror3ORF12640P (95% identity) | M.Ror0ORF2413P | |
| 2414 | 192 aa hypothetical protein | |||
| 3087 | 875 aa hypothetical protein | |||
| 3088 | M | M.Ror5ORF1390P (100% identity) | M.Ror0ORF3088P | |
| 3089 | 75 aa hypothetical protein | |||
| plasmid P1 | ||||
| 5205 | 326 aa hypothetical protein | |||
| 5206 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ror0ORF5206P |
| 5207 | 55 aa hypothetical protein | |||
| 5276 | 106 aa hypothetical protein | |||
| 5277 | M | M.Ssp15303ORFDP (100% identity) | M.Ror0ORF5277P | |
| 5278 | Polyamine aminopropyltransferase | |||
| 5305 | 387 aa hypothetical protein | |||
| 5306 | M | M.Ssp15303ORFEP (95% identity) | M.Ror0ORF5306P | |
| 5307 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 4423 | Toxic protein SymE | |||
| 4424 | R | Rpl10263McrBP (100% identity) | Ror0McrB2P | |
| 4425 | R | Rpl10263McrCP (100% identity) | Ror0McrC2P | |
| 4426 | 100 aa hypothetical protein | |||