Enterobacter cloacae isolate 96 |
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Putative Enterobacter cloacae isolate 96 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 4,892,224 bp | OW849077 |
| chromosome main: | 4,802,485 bp | OW848974 |
| chromosome main: | 4,733,345 bp | OW969601 |
| chromosome main: | 4,854,366 bp | OW969784 |
| plasmid P1: | 127,430 bp | OW848975 |
| plasmid P1: | 311,068 bp | OW969602 |
| plasmid P1: | 314,075 bp | OW969785 |
| plasmid P1: | 424,614 bp | OW849078 |
| plasmid P2: | 40,646 bp | OW849079 |
| plasmid P3: | 40,289 bp | OW848977 |
REBASE acronym:
Org_num:
All begin AI2704V1_, AI2710V1_, AI2992V5_, AI3045V2_, AI3045V2_REPA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 3505 | 119 aa hypothetical protein | |||
| 3506 | M | M.Sma95ORF3770P (100% identity) | GTAYNNNNGTG | M.Ecl96aORF3506P |
| 3507 | S | S.Sma95ORF3770P (100% identity) | GTAYNNNNGTG | S.Ecl96aORF3506P |
| 3508 | R | LadG426ORF18140P (100% identity) | GTAYNNNNGTG | Ecl96aORF3506P |
| 3509 | 197 aa hypothetical protein | |||
| 3877 | 190 aa hypothetical protein | |||
| 3878 | M | M.EclVIM1ORF17805P (100% identity) | M.Ecl96aORF3878P | |
| 3879 | S | S.EclVIM1ORF17805P (100% identity) | S.Ecl96aORF3878P | |
| 3880 | R | EclVIM1ORF17805P (100% identity) | Ecl96aORF3878P | |
| 3881 | 615 aa hypothetical protein | |||
| chromosome main | ||||
| 3392 | 119 aa hypothetical protein | |||
| 3393 | M | M.Sma95ORF3770P (100% identity) | GTAYNNNNGTG | M.Ecl96ORF3393P |
| 3394 | S | S.Sma95ORF3770P (100% identity) | GTAYNNNNGTG | S.Ecl96ORF3393P |
| 3395 | R | LadG426ORF18140P (100% identity) | GTAYNNNNGTG | Ecl96ORF3393P |
| 3396 | 197 aa hypothetical protein | |||
| 3763 | 190 aa hypothetical protein | |||
| 3764 | M | M.EclVIM1ORF17805P (100% identity) | M.Ecl96ORF3764P | |
| 3765 | S | S.EclVIM1ORF17805P (100% identity) | S.Ecl96ORF3764P | |
| 3766 | R | EclVIM1ORF17805P (100% identity) | Ecl96ORF3764P | |
| 3767 | 615 aa hypothetical protein | |||
| chromosome main | ||||
| 3676 | 190 aa hypothetical protein | |||
| 3677 | M | M.EclVIM1ORF17805P (100% identity) | M.Ecl96bORF3677P | |
| 3678 | S | S.EclVIM1ORF17805P (100% identity) | S.Ecl96bORF3677P | |
| 3679 | R | EclVIM1ORF17805P (100% identity) | Ecl96bORF3677P | |
| 3680 | 615 aa hypothetical protein | |||
| chromosome main | ||||
| 568 | 615 aa hypothetical protein | |||
| 569 | R | EclVIM1ORF17805P (100% identity) | Ecl96cORF571P | |
| 570 | S | S.EclVIM1ORF17805P (100% identity) | S.Ecl96cORF571P | |
| 571 | M | M.EclVIM1ORF17805P (100% identity) | M.Ecl96cORF571P | |
| 572 | 190 aa hypothetical protein | |||
| 939 | 197 aa hypothetical protein | |||
| 940 | R | LadG426ORF18140P (100% identity) | Ecl96cORF943P | |
| 941 | S | S.Sma95ORF3770P (58% identity) | S2.Ecl96cORF943P | |
| 29 | pseudogene | |||
| 25 | transposase insH for insertion sequence element IS5R | |||
| 39 | transposase insH for insertion sequence element IS5R | |||
| 942 | 326 aa hypothetical protein | |||
| 1 | transposase | |||
| 27 | 79 aa hypothetical protein | |||
| ??? | S | S.Sma95ORF3770P (29% identity) | S1.Ecl96cORF943P | |
| 943 | M | M.Sma95ORF3770P (100% identity) | M.Ecl96cORF943P | |
| 944 | 119 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 311 | 287 aa hypothetical protein | |||
| 312 | M | M1.Ecl1383ORF310P (100% identity) | M1.Ecl96aORF312P | |
| 313 | M | M2.Ecl1383ORF310P (100% identity) | M2.Ecl96aORF312P | |
| 314 | 355 aa hypothetical protein | |||
| 561 | 865 aa hypothetical protein | |||
| 562 | RM | Ecl96cORF3889P (100% identity) | Ecl96aORF562P | |
| 563 | 1213 aa hypothetical protein | |||
| 2852 | inner membrane transporter YedA | |||
| 2853 | V | V.EroKQ01DcmP (100% identity) | V.Ecl96aDcm2P | |
| 2854 | M | M.Ecl96DcmP (100% identity) | CCWGG | M.Ecl96aDcm2P |
| 2855 | 233 aa hypothetical protein | |||
| 4172 | Ribulose-phosphate 3-epimerase | |||
| 4173 | M | M.Lni187DamP (100% identity) | GATC | M.Ecl96aDamP |
| 4174 | Cell division protein DamX | |||
| chromosome main | ||||
| 502 | 865 aa hypothetical protein | |||
| 503 | RM | Ecl96cORF3889P (100% identity) | Ecl96ORF503P | |
| 504 | 1213 aa hypothetical protein | |||
| 2741 | inner membrane transporter YedA | |||
| 2742 | V | V.EroKQ01DcmP (100% identity) | V.Ecl96DcmP | |
| 2743 | M | M.Ecl96aDcm2P (100% identity) | CCWGG | M.Ecl96DcmP |
| 2744 | 233 aa hypothetical protein | |||
| 4058 | Ribulose-phosphate 3-epimerase | |||
| 4059 | M | M.Lni187DamP (100% identity) | GATC | M.Ecl96DamP |
| 4060 | Cell division protein DamX | |||
| chromosome main | ||||
| 503 | 865 aa hypothetical protein | |||
| 504 | RM | Ecl96cORF3889P (100% identity) | Ecl96bORF504P | |
| 505 | 1213 aa hypothetical protein | |||
| 2656 | inner membrane transporter YedA | |||
| 2657 | V | V.EroKQ01DcmP (100% identity) | V.Ecl96bDcmP | |
| 2658 | M | M.EroKQ01DcmP (98% identity) | CCWGG | M.Ecl96bDcmP |
| 2659 | 233 aa hypothetical protein | |||
| 3971 | Ribulose-phosphate 3-epimerase | |||
| 3972 | M | M.Lni187DamP (100% identity) | GATC | M.Ecl96bDamP |
| 3973 | Cell division protein DamX | |||
| chromosome main | ||||
| 1644 | 233 aa hypothetical protein | |||
| 1645 | M | M.EroKQ01DcmP (98% identity) | CCWGG | M.Ecl96cDcmP |
| 1646 | V | V.EroKQ01DcmP (100% identity) | V.Ecl96cDcmP | |
| 1647 | inner membrane transporter YedA | |||
| 3549 | 52 aa hypothetical protein | |||
| 3550 | M | M.Ero0401ORF7075P (100% identity) | GATC | M.Ecl96cORF3550P |
| 3551 | 80 aa hypothetical protein | |||
| 3888 | 1213 aa hypothetical protein | |||
| 3889 | RM | Ecl96bORF504P (100% identity) | Ecl96cORF3889P | |
| 3890 | 865 aa hypothetical protein | |||
| plasmid P1 | ||||
| 4492 | 73 aa hypothetical protein | |||
| 4493 | M | M.Kpni11ayORF5166P (100% identity) | M.Ecl96ORF4493P | |
| 4494 | SOS response-associated peptidase YedK | |||
| 4499 | 708 aa hypothetical protein | |||
| 4500 | R | Kpn9645ORFAP (100% identity) | CCWGG | Ecl96ORF4501P |
| 4501 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M.Ecl96ORF4501P |
| 4502 | 712 aa hypothetical protein | |||
| plasmid P1 | ||||
| 4498 | 55 aa hypothetical protein | |||
| 4499 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Ecl96bDcm2P |
| 4500 | 326 aa hypothetical protein | |||
| 4602 | 387 aa hypothetical protein | |||
| 4603 | M | M.Ecl96cORF4754P (100% identity) | M.Ecl96bORF4603P | |
| 4604 | 283 aa hypothetical protein | |||
| plasmid P1 | ||||
| 4654 | 55 aa hypothetical protein | |||
| 4655 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Ecl96cORF4655P |
| 4656 | 326 aa hypothetical protein | |||
| 4753 | 387 aa hypothetical protein | |||
| 4754 | M | M.Ecl96bORF4603P (100% identity) | M.Ecl96cORF4754P | |
| 4755 | 283 aa hypothetical protein | |||
| plasmid P1 | ||||
| 4699 | 712 aa hypothetical protein | |||
| 4700 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M.Ecl96aORF4700P |
| 4701 | R | Kpn9645ORFAP (100% identity) | CCWGG | Ecl96aORF4700P |
| 4702 | 708 aa hypothetical protein | |||
| 4707 | SOS response-associated peptidase YedK | |||
| 4708 | M | M.Kpni11ayORF5166P (100% identity) | M.Ecl96aORF4708P | |
| 4709 | 73 aa hypothetical protein | |||
| 4815 | 55 aa hypothetical protein | |||
| 4816 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Ecl96aDcmP |
| 4817 | 326 aa hypothetical protein | |||
| 4929 | 387 aa hypothetical protein | |||
| 4930 | M | M.Ecl96cORF4754P (100% identity) | M.Ecl96aORF4930P | |
| 4931 | 283 aa hypothetical protein | |||
| plasmid P2 | ||||
| 4978 | 190 aa hypothetical protein | |||
| 4979 | R | Sma31ORF25925P (96% identity) | CTCGAG | Ecl96aORF4979P |
| 4980 | 82 aa hypothetical protein | |||
| plasmid P3 | ||||
| 4633 | 190 aa hypothetical protein | |||
| 4634 | R | Sma31ORF25925P (96% identity) | CTCGAG | Ecl96ORF4634P |
| 4635 | 82 aa hypothetical protein | |||