Escherichia coli 19SZHZ663Rt |
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Putative Escherichia coli 19SZHZ663Rt RM systems
Ref: Liu,B. et al. unpublished
REBASE ref # 34563
| Sequence length: | GenBank #: | |
| Chromosome: | 4,722,146 bp | CP080075 |
| plasmid p663Rt_IncR: | 144,481 bp | CP080076 |
REBASE acronym: Eco633Rt
Org_num: 58512
All begin KZO16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14125 | GTPase family protein | |||
| 14130 | M | M.SflN97ORF14060P (100% identity) | M.Eco633RtORF14130P | |
| 14135 | S | S.SflN97ORF14060P (100% identity) | S.Eco633RtORF14130P | |
| 14140 | R | SflN97ORF14060P (100% identity) | Eco633RtORF14130P | |
| 14145 | IS1 family transposase | |||
| 19355 | 322 aa hypothetical protein | |||
| 19360 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco633RtORF19365P |
| 19365 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco633RtORF19365P |
| 19370 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco633RtORF19365P |
| 19375 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco633RtDamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 8770 | HD domain-containing protein | |||
| 8775 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco633RtDcmP |
| 8780 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco633RtDcmP |
| 8785 | drug/metabolite exporter YedA | |||
| 17465 | phage holin, lambda family | |||
| 17470 | M | M.SflN107ORF17955P (100% identity) | M.Eco633RtORF17470P | |
| 17475 | 67 aa hypothetical protein | |||
| 17500 | LexA family transcriptional regulator | |||
| 17505 | M | M.SflN107ORF17990P (100% identity) | GATC | M.Eco633RtORF17505P |
| 17510 | PerC family transcriptional regulator | |||
| 19560 | HNH endonuclease | |||
| 19565 | R | SflN101ORF11875P (100% identity) | Eco633RtORF19565P | |
| 19570 | AAA family ATPase | |||
| 19610 | DEAD/DEAH box helicase family protein | |||
| 19615 | M | M.PmiCZP44ORF11275P (100% identity) | M.Eco633RtORF19615P | |
| 19620 | DUF3780 and DUF4357 domain-containing protein | |||
| plasmid p663Rt_IncR | ||||
| 23095 | 102 aa hypothetical protein | |||
| 23100 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco633RtORF23100P |
| 23105 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14300 | IS5 family transposase | |||
| 14305 | R | SflN97McrCP (100% identity) | Eco633RtMcrCP | |
| 14310 | R | SflN97McrBP (100% identity) | Eco633RtMcrBP | |
| 14315 | zinc-ribbon domain-containing protein | |||
| 19375 | endoribonuclease SymE | |||
| 19380 | R | Ecos673GmrDP (100% identity) | Eco633RtGmrDP | |
| 19385 | R | SflN101GmrSP (100% identity) | Eco633RtGmrSP | |
| 19390 | DUF1127 domain-containing protein | |||