Pseudomonas avellanae NCPPB 4222 |
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Putative Pseudomonas avellanae NCPPB 4222 RM systems
Ref: Turco,S. et al. J Phytopathol (1986) (2022) In press
REBASE ref # 34600
| Sequence length: | GenBank #: | |
| Chromosome: | 6,062,886 bp | CP091147 |
| plasmid p1NCPPB4222: | 110,191 bp | CP091148 |
REBASE acronym: Pav4222
Org_num: 58818
All begin L2Y01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1680 | IS21-like element ISPsy20 family helper ATPase | |||
| 1685 | R | Psy4326ORF535P (45% identity) | Pav4222ORF1685P | |
| 1690 | C | C.Psp22131ORFBP (60% identity) | C.Pav4222ORF1685P | |
| 1695 | 271 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7560 | 206 aa hypothetical protein | |||
| 7565 | M | M.Psy3272ORF1230P (97% identity) | M.Pav4222ORF7565P | |
| 7570 | 163 aa hypothetical protein | |||
| 7785 | glycoside hydrolase family 19 protein | |||
| 7790 | M | M.PpoB116ORF12310P (93% identity) | M.Pav4222ORF7790P | |
| 7795 | ATP-binding protein | |||
| plasmid p1NCPPB4222 | ||||
| 27535 | IS21 family transposase | |||
| 27540 | M | M.Pce963ORF200105P (95% identity) | M.Pav4222ORF27540P | |
| 27545 | R | Pav3491ORF28960P (100% identity) | Pav4222ORF27540P | |
| 27550 | 57 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 535 | 263 aa hypothetical protein | |||
| 540 | R | PsyPaVt10ORFCP (100% identity) | Pav4222ORF540P | |
| 545 | 100 aa hypothetical protein | |||
| plasmid p1NCPPB4222 | ||||
| 27580 | IS3 family transposase | |||
| 27585 | R | XcaXY11ORF15915P (91% identity) | Pav4222ORF27590P | |
| 27590 | M | M.Pae9433I (75% identity) | M.Pav4222ORF27590P | |
| 27595 | UvrD-helicase domain-containing protein | |||