Roseburia intestinalis NB2A 31_NB |
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Putative Roseburia intestinalis NB2A 31_NB RM systems
Ref: Spreafico,A. et al. Nat Cancer (2022) In press
REBASE ref # 34529
Complete sequence: 4,090,713 bp
GenBank #: CP097279
REBASE acronym: Rin31NB
Org_num: 58828
All begin M5E85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2035 | replication initiation protein | |||
| 2040 | M | M.EspCORF1799P (95% identity) | M.Rin31NBORF2040P | |
| 2045 | S | S.Bcr2876ORF5435P (64% identity) | S.Rin31NBORF2040P | |
| 2050 | toll/interleukin-1 receptor domain-containing | |||
| 2055 | R | EspCORF1799P (93% identity) | Rin31NBORF2040P | |
| 2060 | 164 aa hypothetical protein | |||
| 2855 | helix-turn-helix transcriptional regulator | |||
| 2860 | M | M.Bob29174ORF1850P (98% identity) | M.Rin31NBORF2860P | |
| 2865 | S | S.PmeBin145ORFCP (99% identity) | S.Rin31NBORF2860P | |
| 2870 | R | PmeBin133ORFBP (96% identity) | Rin31NBORF2860P | |
| 2875 | 498 aa hypothetical protein | |||
| 10820 | site-specific integrase | |||
| 10825 | R | PmeBin363ORFCP (80% identity) | Rin31NBORF10865P | |
| 10830 | 146 aa hypothetical protein | |||
| 10835 | DUF3990 domain-containing protein | |||
| 10840 | S | S1.Rin31NBORF10865P (43% identity) | S2.Rin31NBORF10865P | |
| 10845 | NADAR family protein | |||
| 10850 | 149 aa hypothetical protein | |||
| 10855 | DUF3990 domain-containing protein | |||
| 10860 | S | S.AhaPEL85ORFKP (48% identity) | S1.Rin31NBORF10865P | |
| 10865 | M | M.EspMSJ33ORF6695P (87% identity) | M.Rin31NBORF10865P | |
| 10870 | 174 aa hypothetical protein | |||
| 17215 | Mrr restriction system protein | |||
| 17220 | R | RtoL2ORF30870P (99% identity) | Rin31NBORF17250P | |
| 17225 | 282 aa hypothetical protein | |||
| 17230 | S | S2.ObaCMORF1650P (63% identity) | S3.Rin31NBORF17250P | |
| 17235 | S | S2.Dlo30306ORF11365P (98% identity) | S2.Rin31NBORF17250P | |
| 17240 | tyrosine-type recombinase/integrase | |||
| 17245 | S | S1.RtoL2ORF30870P (88% identity) | S1.Rin31NBORF17250P | |
| 17250 | M | M.Bob29174ORF1025P (99% identity) | M.Rin31NBORF17250P | |
| 17255 | C | C.RtoL2ORF30870P (100% identity) | C.Rin31NBORF17250P | |
| 17260 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1625 | DUF4314 domain-containing protein | |||
| 1630 | M | M.RinL182ORF465P (99% identity) | M.Rin31NBORF1630P | |
| 1635 | 149 aa hypothetical protein | |||
| 1730 | DUF6045 family protein | |||
| 1735 | M | M.Rin6ORF1720P (100% identity) | M.Rin31NBORF1735P | |
| 1740 | 92 aa hypothetical protein | |||
| 4615 | helix-turn-helix domain-containing protein | |||
| 4620 | M | M.RgnA29149DndCP (81% identity) | M.Rin31NBDndCP | |
| 4625 | AAA family ATPase | |||
| 4620 | DNA phosphorothioation system sulfurtransferase | |||
| 4625 | M | M.BprPMF1DndDP (37% identity) | M.Rin31NBDndDP | |
| 4630 | DndE family protein | |||
| 4625 | AAA family ATPase | |||
| 4630 | M | M.BprPMF1DndEP (89% identity) | M.Rin31NBDndEP | |
| 4635 | cysteine desulfurase | |||
| 6445 | antirestriction protein ArdA | |||
| 6450 | M | M.PmeBin391ORFDP (100% identity) | M.Rin31NBORF6450P | |
| 6455 | 118 aa hypothetical protein | |||
| 12840 | Abi family protein | |||
| 12845 | V | V.LbaNSJ4ORF12205P (93% identity) | V.Rin31NBORF12860P | |
| 12850 | helix-turn-helix transcriptional regulator | |||
| 12855 | HNH endonuclease | |||
| 12860 | M | M.LbaNSJ4ORF12205P (94% identity) | M.Rin31NBORF12860P | |
| 12865 | PD-(D/E)XK motif protein | |||
| 12865 | PD-(D/E)XK motif protein | |||
| 12870 | M | M.LbaNSJ4ORF12215P (99% identity) | M.Rin31NBORF12870P | |
| 12875 | 240 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12400 | (deoxy)nucleoside triphosphate | |||
| 12405 | R | RinLORF6814P (65% identity) | Rin31NBORF12405P | |
| 12410 | recombinase family protein | |||