Citrobacter freundii Cf7308 |
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Putative Citrobacter freundii Cf7308 RM systems
Ref: Wang,L. et al. Infect Drug Resist 15, 2235-2242 (2022)
REBASE ref # 34551
| Sequence length: | GenBank #: | |
| Chromosome: | 5,108,147 bp | CP092463 |
| plasmid unnamed1: | 319,832 bp | CP092464 |
| plasmid unnamed2: | 59,165 bp | CP092465 |
REBASE acronym: Cfr7308
Org_num: 58405
All begin LY266_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22660 | M48 family metallopeptidase | |||
| 22665 | R | CfrNIH4ORF24355P (100% identity) | CRAAYNNNNNNTCNNC | Cfr7308ORF22685P |
| 22670 | DNA binding domain-containing protein | |||
| 22675 | AAA family ATPase | |||
| 22680 | S | S.Sxi6416ORF5545P (100% identity) | CRAAYNNNNNNTCNNC | S.Cfr7308ORF22685P |
| 22685 | M | M.CfrNIH4ORF24355P (100% identity) | CRAAYNNNNNNTCNNC | M.Cfr7308ORF22685P |
| 22690 | transcription factor | |||
| plasmid unnamed1 | ||||
| 25645 | ISL3 family transposase | |||
| 25650 | R | LadZ961ORF22445P (99% identity) | Cfr7308ORF25660P | |
| 25655 | S | S.LadZ961ORF22445P (100% identity) | S.Cfr7308ORF25660P | |
| 25660 | M | M.LadZ961ORF22445P (100% identity) | M.Cfr7308ORF25660P | |
| 25665 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1535 | cell division protein DamX | |||
| 1540 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr7308DamP |
| 1545 | ribulose-phosphate 3-epimerase | |||
| 3125 | DUF3850 domain-containing protein | |||
| 3130 | M | M.CfrHORF3130P (100% identity) | GATC | M.Cfr7308ORF3130P |
| 3135 | 70 aa hypothetical protein | |||
| 7115 | 59 aa hypothetical protein | |||
| 7120 | M | M.CspCF971ORF20840P (99% identity) | M.Cfr7308ORF7120P | |
| 7125 | 220 aa hypothetical protein | |||
| 9965 | phosphohydrolase | |||
| 9970 | M | M.CfrMH13III (100% identity) | CCWGG | M.Cfr7308ORF9970P |
| 9975 | V | V.CspMGH103ORFHP (100% identity) | CCWGG | V.Cfr7308ORF9970P |
| 9980 | drug/metabolite exporter YedA | |||
| 10545 | 250 aa hypothetical protein | |||
| 10550 | M | M.Cfr7308ORF15200P (100% identity) | M.Cfr7308ORF10550P | |
| 10555 | 72 aa hypothetical protein | |||
| 15195 | 72 aa hypothetical protein | |||
| 15200 | M | M.Cfr7308ORF10550P (100% identity) | M.Cfr7308ORF15200P | |
| 15205 | 250 aa hypothetical protein | |||
| 21415 | RM | CfrMH13II (100% identity) | AGCANCC | Cfr7308ORF21415P |
| 21420 | DEAD/DEAH box helicase | |||
| plasmid unnamed1 | ||||
| 24850 | 76 aa hypothetical protein | |||
| 24855 | M | M.Sen3039ORF24445P (100% identity) | GATC | M.Cfr7308ORF24855P |
| 24860 | DNA polymerase III subunit beta | |||
| 25050 | IS1 family transposase | |||
| 25055 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Cfr7308ORF25055P |
| 25060 | R | YpsR1ORFAP (100% identity) | CCWGG | Cfr7308ORF25055P |
| 25065 | recombinase family protein | |||
| plasmid unnamed2 | ||||
| 26505 | EAL domain-containing protein | |||
| 26510 | R | YpsR1ORFAP (100% identity) | CCWGG | Cfr7308ORF26515P |
| 26515 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Cfr7308ORF26515P |
| 26520 | IS1 family transposase | |||