Xanthomonas arboricola pv. corylina IVIA 3978 |
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Putative Xanthomonas arboricola pv. corylina IVIA 3978 RM systems
Ref: Cuesta-Morrondo,S. et al. Phytopathology, PHYTO10210436A (2022) In press
REBASE ref # 34528
Complete sequence: 5,062,837 bp
GenBank #: CP076534
REBASE acronym: Xar3978
Org_num: 58883
All begin KPG65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11295 | IS4 family transposase | |||
| 11300 | M | M.Xca33086ORF18150P (92% identity) | M.Xar3978ORF11300P | |
| 11305 | nucleotidyltransferase substrate binding | |||
| 11310 | S | S.XarJ303ORF11260P (94% identity) | S.Xar3978ORF11300P | |
| 11315 | abortive infection family protein | |||
| 11320 | 224 aa hypothetical protein | |||
| 11325 | R | Xca33086ORF18150P (99% identity) | Xar3978ORF11300P | |
| 11330 | 98 aa hypothetical protein | |||
| 20825 | restriction endonuclease subunit S | |||
| 20830 | M | M.Xca17ORF10095P (100% identity) | M.Xar3978ORF20830P | |
| 20835 | damage-inducible protein D | |||
| 20840 | virulence RhuM family protein | |||
| 20845 | S | S.Xar417ORF13050P (100% identity) | S.Xar3978ORF20830P | |
| 20850 | R | Xca33086ORF8570P (99% identity) | Xar3978ORF20830P | |
| 20855 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9050 | 8-oxoguanine DNA glycosylase | |||
| 9055 | M | M.Xcu359ORF15700P (96% identity) | M.Xar3978ORF9055P | |
| 9060 | TniQ family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11960 | helix-turn-helix domain-containing protein | |||
| 11965 | M | M.Xar301ORF32620P (100% identity) | M.Xar3978ORF11965P | |
| 11970 | R | Xar6600ORF32590P (99% identity) | Xar3978ORF11965P | |
| 11975 | abortive infection family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11280 | type II toxin-antitoxin system RelE/ParE family | |||
| 11285 | R | Xca33086MrrP (100% identity) | Xar3978MrrP | |
| 11295 | IS4 family transposase | |||