Xanthomonas arboricola pv. juglandis IVIA 1317 |
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Putative Xanthomonas arboricola pv. juglandis IVIA 1317 RM systems
Ref: Cuesta-Morrondo,S. et al. Phytopathology, PHYTO10210436A (2022) In press
REBASE ref # 34528
Complete sequence: 5,271,558 bp
GenBank #: CP076725
REBASE acronym: Xar1317
Org_num: 58282
All begin KP727_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6275 | IS5 family transposase | |||
| 6280 | M | M.Xca33086ORF18150P (95% identity) | M.Xar1317ORF6280P | |
| 6285 | nucleotidyltransferase substrate binding | |||
| 6290 | S | S.XarJ303ORF11260P (94% identity) | S.Xar1317ORF6280P | |
| 6295 | abortive infection family protein | |||
| 6300 | 224 aa hypothetical protein | |||
| 6305 | R | Xca33086ORF18150P (100% identity) | Xar1317ORF6280P | |
| 6310 | 98 aa hypothetical protein | |||
| 16305 | restriction endonuclease subunit S | |||
| 16310 | M | M.Xca33086ORF8570P (100% identity) | CAACNNNNNGGT | M.Xar1317II |
| 16315 | damage-inducible protein D | |||
| 16320 | virulence RhuM family protein | |||
| 16325 | S | S.Xar417ORF13050P (100% identity) | CAACNNNNNGGT | S.Xar1317II |
| 16330 | R | Xca33086ORF8570P (100% identity) | CAACNNNNNGGT | Xar1317IIP |
| 16335 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5880 | molybdenum cofactor biosynthesis protein MoaE | |||
| 5890 | M | M.Xca33086ORF5030P (100% identity) | M.Xar1317ORF5890P | |
| 5895 | RM | Xari3ORF3292P (100% identity) | Xar1317ORF5890P | |
| 5900 | 65 aa hypothetical protein | |||
| 8765 | phage portal protein | |||
| 8775 | M | M2.Xca33086ORF3820P (100% identity) | M1.Xar1317ORF8775P | |
| 8780 | M | M1.Xar2499ORF3665P (100% identity) | M2.Xar1317ORF8775P | |
| 8785 | R | Xca33085ORF3130P (100% identity) | Xar1317ORF8775P | |
| 8790 | GspH/FimT family pseudopilin | |||
| 11245 | 78 aa hypothetical protein | |||
| 11250 | M | M.Xar554ORF2322P (100% identity) | M.Xar1317ORF11250P | |
| 11255 | DNA topoisomerase III | |||
| 13785 | McrC family protein | |||
| 13790 | V | V.Xar554ORF1809P (100% identity) | V.Xar1317ORF13795P | |
| 13795 | M | M.Xar554ORF1809P (89% identity) | M.Xar1317ORF13795P | |
| 13800 | transcriptional regulator | |||
| 17120 | DNA topoisomerase III | |||
| 17125 | M | M.Xar2499ORF17720P (100% identity) | M.Xar1317ORF17125P | |
| 17130 | 188 aa hypothetical protein | |||
| 19850 | 95 aa hypothetical protein | |||
| 19855 | M | M.Xar554ORF545P (100% identity) | GTCGAC | M.Xar1317I |
| 19860 | R | Xar554ORF545P (100% identity) | GTCGAC | Xar1317IP |
| 19865 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17225 | AAA family ATPase | |||
| 17230 | R | Xar2499ORF17610P (100% identity) | Xar1317ORF17235P | |
| 17235 | M | M.Xar2499ORF17610P (100% identity) | M.Xar1317ORF17235P | |
| 17240 | ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6260 | type II toxin-antitoxin system RelE/ParE family | |||
| 6265 | R | Xca33086MrrP (100% identity) | Xar1317Mrr2P | |
| 6275 | IS5 family transposase | |||
| 13775 | site-specific integrase | |||
| ??? | R | Xar554McrBP (100% identity) | Xar1317McrBP | |
| 13785 | R | Xar554McrCP (100% identity) | Xar1317McrCP | |
| 13790 | very short patch repair endonuclease | |||
| 22225 | 139 aa hypothetical protein | |||
| 22230 | R | Xari3Mrr2P (100% identity) | Xar1317MrrP | |
| 22235 | IS4 family transposase | |||