Escherichia coli EFF60 |
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Putative Escherichia coli EFF60 RM systems
Ref: Tian,T. et al. Sci Total Environ 834, 155321 (2022)
REBASE ref # 34565
| Sequence length: | GenBank #: | |
| Chromosome: | 5,063,268 bp | CP086678 |
| plasmid pMADE-1: | 262,144 bp | CP086679 |
| plasmid pMADE-3: | 135,562 bp | CP086681 |
REBASE acronym: EcoEFF60
Org_num: 58519
All begin
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | RM | EcoTHYM1ORF21205P (99% identity) | EcoEFF60ORFJP | |
| ??? | M | M.SflLIN17ORF17405P (99% identity) | M.EcoEFF60ORFNP | |
| ??? | M | M.EcoYA1ORF6980P (94% identity) | M.EcoEFF60ORFMP | |
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEFF60DamP |
| ??? | M | M.EcosS1ORF18905P (99% identity) | ATGCAT | M.EcoEFF60ORFCP |
| ??? | M | M.EspP049ORF3048P (99% identity) | M.EcoEFF60ORFDP | |
| ??? | M | M.Eco3936DcmP (100% identity) | CCWGG | M.EcoEFF60DcmP |
| ??? | V | V.EcoK12PDcmP (98% identity) | V.EcoEFF60DcmP | |
| ??? | M | M.Sen58011ORF9805P (100% identity) | M.EcoEFF60ORFIP | |
| plasmid pMADE-1 | ||||
| ??? | M | M.YpsF1ORFCP (93% identity) | M.EcoEFF60ORFFP | |
| ??? | M | M.YpsF1ORFDP (53% identity) | M.EcoEFF60ORFLBP | |
| ??? | M | M.YpsF1ORFDP (46% identity) | M.EcoEFF60ORFLAP | |
| ??? | M | M.YpsF1ORFBP (100% identity) | M.EcoEFF60ORFHP | |
| ??? | M | M.YpsF1ORFCP (93% identity) | M.EcoEFF60ORFGP | |
| plasmid pMADE-3 | ||||
| ??? | R | EcoS1632ORFCP (100% identity) | GCWGC | EcoEFF60ORFBP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMADE-3 | ||||
| ??? | R | SenSL0052ORF25975P (100% identity) | AGACC | EcoEFF60ORFKP |
| ??? | M | M.Sen68045ORF16165P (100% identity) | AGACC | M.EcoEFF60ORFKP |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.SflLIN11ORF7170P (100% identity) | GATC | M.EcoEFF60ORFEP |