Salmonella enterica 1559 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica 1559 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 5,021,524 bp | CP091547 |
| plasmid p1559-mcr: | 271,705 bp | CP091548 |
REBASE acronym: Sens1559
Org_num: 58833
All begin L4413_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2825 | endoribonuclease SymE | |||
| 2830 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sens1559ORF2835P |
| 2835 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sens1559ORF2835P |
| 2840 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sens1559ORF2835P |
| 2845 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1185 | PerC family transcriptional regulator | |||
| 1190 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sens1559ORF1190P |
| 1195 | LexA family transcriptional regulator | |||
| 2675 | AAA family ATPase | |||
| 2680 | RM | StyUK1IV (100% identity) | GATCAG | Sens1559ORF2680P |
| 2685 | BREX system P-loop protein BrxC | |||
| 4940 | PerC family transcriptional regulator | |||
| 4945 | M | M.Sens418ORF4945P (100% identity) | GATC | M.Sens1559ORF4945P |
| 4950 | LexA family transcriptional regulator | |||
| 4975 | 92 aa hypothetical protein | |||
| 4980 | M | M.SensSZL38ORF10585P (100% identity) | M.Sens1559ORF4980P | |
| 4985 | phage holin, lambda family | |||
| 13595 | drug/metabolite exporter YedA | |||
| 13600 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sens1559DcmP |
| 13605 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sens1559DcmP |
| 13610 | phosphohydrolase | |||
| 13855 | RusA family crossover junction | |||
| 13860 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sens1559ORF13860P |
| 13865 | PerC family transcriptional regulator | |||
| 17205 | DUF551 domain-containing protein | |||
| 17210 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sens1559ORF17210P |
| 17215 | ead/Ea22-like family protein | |||
| 17605 | IS6-like element IS26 family transposase | |||
| 17610 | M | M.StyCORF187P (37% identity) | M.Sens1559ORF17610P | |
| 17615 | thermonuclease family protein | |||
| 21305 | DNA-binding transcriptional regulator Fis | |||
| 21310 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sens1559ORF21310P |
| 21315 | DUF2556 family protein | |||
| 21800 | ribulose-phosphate 3-epimerase | |||
| 21805 | M | M.StyTDamP (100% identity) | GATC | M.Sens1559DamP |
| 21810 | cell division protein DamX | |||
| plasmid p1559-mcr | ||||
| 25525 | 55 aa hypothetical protein | |||
| 25530 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sens1559ORF25530P |
| 25535 | thermonuclease family protein | |||
| 26060 | 48 aa hypothetical protein | |||
| 26065 | M | M.YpsF1ORFBP (100% identity) | M.Sens1559ORF26065P | |
| 26070 | 202 aa hypothetical protein | |||
| 26180 | DNA-binding protein | |||
| 26185 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sens1559ORF26185P |
| 26190 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5435 | MFS transporter | |||
| 5440 | M | M.StyUK1I (100% identity) | CAGAG | M.Sens1559ORF5440P |
| 5445 | R | StyUK1IP (99% identity) | CAGAG | Sens1559ORF5440P |
| 5450 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2840 | type I restriction-modification system | |||
| 2845 | R | StyUK1MrrP (100% identity) | Sens1559MrrP | |
| 2850 | BrnT family toxin | |||