Pseudanabaena yagii GIHE-NHR1 |
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Putative Pseudanabaena yagii GIHE-NHR1 RM systems
Ref: Jeong,J. unpublished
REBASE ref # 31232
GenBank #: JAAVJL000000000
REBASE acronym: PyaNHR1
Org_num: 58143
All begin HC246_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24420 | type IV secretory system conjugative DNA | |||
| 24425 | M | M.Tbo703ORF13510P (91% identity) | M.PyaNHR1ORF24425P | |
| 24430 | S | S.Ssp8807ORF11930P (13% identity) | S1.PyaNHR1ORF24425P | |
| 24435 | IS1 family transposase | |||
| 24440 | S | M.Csp4102ORF3970P (21% identity) | S2.PyaNHR1ORF24425P | |
| 24445 | abortive infection family protein | |||
| 24450 | R | Asp90ORF12925P (82% identity) | PyaNHR1ORF24425P | |
| 24455 | 871 aa hypothetical protein | |||
| 18245 | 209 aa hypothetical protein | |||
| 18250 | R | DspB1220ORF15210P (76% identity) | PyaNHR1ORF18260P | |
| 18255 | 306 aa hypothetical protein | |||
| 18260 | M | Csp8802ORF725P (32% identity) | M.PyaNHR1ORF18260P | |
| 18265 | 123 aa hypothetical protein | |||
| 18270 | 107 aa hypothetical protein | |||
| 18275 | S | S.PbaLS401ORF14945P (27% identity) | S.PyaNHR1ORF18260P | |
| 18280 | ShlB/FhaC/HecB family hemolysin | |||
| 2685 | late competence development ComFB family | |||
| 2690 | M | M.Nsp4103ORF65920P (34% identity) | M.PyaNHR1ORF2690AP | |
| 2695 | ISAs1 family transposase | |||
| 2700 | M | M.Hhy1100ORF4893P (36% identity) | M.PyaNHR1ORF2690BP | |
| 2705 | fatty-acid oxidation protein subunit alpha | |||
| 2710 | XisI protein | |||
| 2715 | SocA family protein | |||
| 2720 | type II toxin-antitoxin system PemK/MazF family | |||
| 2725 | S | S2.AmaS15ORF15375P (44% identity) | S.PyaNHR1ORF2690P | |
| 2730 | XisH protein | |||
| 2735 | XisI protein | |||
| 2740 | Uma2 family endonuclease | |||
| 2745 | R | Nsp4103ORF65920P (74% identity) | PyaNHR1ORF2690P | |
| 2755 | glutaredoxin family protein | |||
| 4025 | 16S rRNA (cytosine(1402)-N(4))-methyltransferase | |||
| 4030 | M | M.Psp1811ORFDP (97% identity) | GYAGNNNNNNCATC | M.PyaNHR1I |
| 4035 | BrnT family toxin | |||
| 4040 | BrnA antitoxin family protein | |||
| 4045 | Uma2 family endonuclease | |||
| 4050 | S | S2.MspMP1ORF20525P (47% identity) | GYAGNNNNNNCATC | S.PyaNHR1I |
| 4055 | GxxExxY protein | |||
| 4060 | toxin-antitoxin system toxin component, | |||
| 4065 | AbrB/MazE/SpoVT family DNA-binding | |||
| 4070 | R | Psp1811ORFDP (97% identity) | GYAGNNNNNNCATC | PyaNHR1IP |
| 4075 | acetolactate synthase small subunit | |||
| 5970 | cysteine--tRNA ligase | |||
| 5975 | M | M.FpsCHN38ORF7300P (60% identity) | M.PyaNHR1ORF5975P | |
| 5980 | IS630 family transposase | |||
| 8405 | 112 aa hypothetical protein | |||
| 8410 | S | S.LboDg5ORFJP (37% identity) | GAGNNNNNNNGTCG | S.PyaNHR1III |
| 8415 | DUF433 domain-containing protein | |||
| 8420 | DUF5615 family PIN-like protein | |||
| 8425 | 96 aa hypothetical protein | |||
| 8430 | M | M.Rsi800ORF2339P (74% identity) | GAGNNNNNNNGTCG | M.PyaNHR1III |
| 8435 | R | Afl14aORF9335P (62% identity) | GAGNNNNNNNGTCG | PyaNHR1IIIP |
| 8440 | undecaprenyl/decaprenyl-phosphate | |||
| 8960 | 322 aa hypothetical protein | |||
| 8965 | R | Pga1313ORF24450P (61% identity) | RAAANNNNNNCTGG | PyaNHR1IIP |
| 8970 | type II toxin-antitoxin system PemK/MazF family | |||
| 8975 | DUF2281 domain-containing protein | |||
| 8980 | S | S.AspHDW3ORF14210P (38% identity) | RAAANNNNNNCTGG | S2.PyaNHR1II |
| 8985 | 50 aa hypothetical protein | |||
| 8990 | 50 aa hypothetical protein | |||
| 8995 | 59 aa hypothetical protein | |||
| 9000 | S | S1.TlaMK1ORF1515P (40% identity) | S1.PyaNHR1IIP | |
| 9005 | Uma2 family endonuclease | |||
| 9010 | 95 aa hypothetical protein | |||
| 9015 | M | M.NspNUC1ORF10167P (76% identity) | RAAANNNNNNCTGG | M.PyaNHR1II |
| 9020 | magnesium-protoporphyrin IX monomethyl ester | |||
| 16880 | methionyl-tRNA formyltransferase | |||
| 16885 | M | M.Asp8005ORF11156P (82% identity) | M.PyaNHR1ORF16885P | |
| 16890 | R | Avi180ORF3176P (55% identity) | PyaNHR1ORF16885P | |
| 16895 | Txe/YoeB family addiction module toxin | |||
| 16900 | 74 aa hypothetical protein | |||
| 16905 | 74 aa hypothetical protein | |||
| 16910 | S | S.SspS95ORFAP (22% identity) | S.PyaNHR1ORF16885P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23860 | 67 aa hypothetical protein | |||
| 23865 | M | M.Pmu1806ORFKP (98% identity) | M.PyaNHR1ORF23865P | |
| 23870 | 220 aa hypothetical protein | |||
| 2290 | MerR family transcriptional regulator | |||
| 2295 | RM | Pmu1806ORFHP (69% identity) | PyaNHR1ORF2295P | |
| 2300 | 223 aa hypothetical protein | |||
| 2365 | 93 aa hypothetical protein | |||
| 2370 | RM | Dco806ORF38090P (74% identity) | PyaNHR1ORF2370P | |
| 2375 | DUF3800 domain-containing protein | |||
| 2930 | HNH endonuclease | |||
| 2935 | M | M.Psp1811ORFGP (83% identity) | M.PyaNHR1ORF2935P | |
| 2940 | fatty acid desaturase | |||
| 5955 | ABC transporter permease | |||
| 5960 | M | M.PspRG53ORF843P (90% identity) | M.PyaNHR1ORF5960P | |
| 5965 | DUF4253 domain-containing protein | |||
| 7070 | NACHT domain-containing protein | |||
| 7075 | M | M.PspRG53ORF235P (93% identity) | M.PyaNHR1ORF7075P | |
| 7080 | R | PspRG53ORF235P (93% identity) | PyaNHR1ORF7075P | |
| 7085 | IS630 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 265 | ASCH domain-containing protein | |||
| 270 | R | Btu2912MrrP (59% identity) | PyaNHR1MrrP | |
| 275 | photosynthetic/respiratory NAD(P)H-quinone | |||
| 24320 | 70 aa hypothetical protein | |||
| 24325 | R | Psp1811McrCP (91% identity) | PyaNHR1McrCP | |
| 24330 | R | Psp1811McrBP (60% identity) | PyaNHR1McrBP | |
| 24335 | transcriptional regulator | |||
| 5800 | type II toxin-antitoxin system Phd/YefM family | |||
| 5805 | R | Pmu1806MrrP (86% identity) | PyaNHR1Mrr2P | |
| 5810 | C-3,4 desaturase CrtD | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10405 | 2-phosphosulfolactate phosphatase family | |||
| 10410 | M | M.Psp1811ORFEP (97% identity) | GATC | M.PyaNHR1IV |
| 10415 | 139 aa hypothetical protein | |||