Pediococcus pentosaceus MGB0620 |
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Putative Pediococcus pentosaceus MGB0620 RM systems
Ref: Roh,S.W. unpublished
REBASE ref # 22229
| Sequence length: | GenBank #: | |
| Chromosome: | 1,828,297 bp | CP085471 |
| plasmid pMGB0620-1: | 57,704 bp | CP085472 |
| plasmid pMGB0620-2: | 54,507 bp | CP085473 |
| plasmid pMGB0620-4: | 49,186 bp | CP085475 |
REBASE acronym: Ppe620
Org_num: 58201
All begin Ped0620_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMGB0620-1 | ||||
| 9405 | IS6 family transposase | |||
| 9410 | S | S.Ppe941ORF9395P (100% identity) | S.Ppe620ORF9415P | |
| 9415 | M | M.Lbr521I (98% identity) | M.Ppe620ORF9415P | |
| 9420 | R | Ppe941ORF9395P (100% identity) | Ppe620ORF9415P | |
| 9425 | recombinase family protein | |||
| plasmid pMGB0620-4 | ||||
| 10400 | helix-turn-helix domain-containing protein | |||
| 10140 | R | Ppe194ORF1864P (98% identity) | Ppe620ORF10145P | |
| 10145 | M | M.Ppe194ORF1864P (98% identity) | M.Ppe620ORF10145P | |
| 10150 | S | S.Lol15707ORF1765P (97% identity) | S.Ppe620ORF10145P | |
| 10155 | holin-like toxin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMGB0620-2 | ||||
| 9590 | AAA family ATPase | |||
| 9595 | RM | Pda1533ORF66P (99% identity) | Ppe620ORF9600P | |
| 9600 | M | M.Lsp3606ORF11875P (97% identity) | M.Ppe620ORF9600P | |
| 9605 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6895 | ABC transporter permease | |||
| 6900 | R | Ppe941ORF6915P (100% identity) | Ppe620ORF6900P | |
| 6905 | DUF4767 domain-containing protein | |||