Vibrio species ED004 |
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Putative Vibrio species ED004 RM systems
Ref: Bruce,T. et al. unpublished
REBASE ref # 34407
Complete sequence: 3,855,889 bp
GenBank #: CP066149
REBASE acronym: VspED004
Org_num: 58016
All begin ITG10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8070 | DEAD/DEAH box helicase family protein | |||
| 8075 | M | M.Vta4600ORF3178P (74% identity) | M1.VspED004ORF8075P | |
| 8080 | M | M.VhaE385ORFDP (87% identity) | M2.VspED004ORF8075P | |
| 8085 | S | S.VhaBSW7ORF6735P (44% identity) | S.VspED004ORF8075P | |
| 8090 | R | VleF12IP (97% identity) | VspED004ORF8075P | |
| 8095 | 463 aa hypothetical protein | |||
| 12930 | DEAD/DEAH box helicase family protein | |||
| 12935 | R | VbaORF1910P (99% identity) | VspED004ORF12950P | |
| 12940 | elongation factor Ts | |||
| 12945 | 49 aa hypothetical protein | |||
| 12950 | M | M.VbaORF1910P (95% identity) | M.VspED004ORF12950P | |
| 12955 | S | S.Vsp43009ORF10790P (68% identity) | S.VspED004ORF12950P | |
| 12960 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2875 | DNA phosphorothioation-associated putative | |||
| 2880 | M | M.VcyED287DndBP (99% identity) | M.VspED004DndBP | |
| 2885 | DNA phosphorothioation system sulfurtransferase | |||
| 2880 | DNA sulfur modification protein DndB | |||
| 2885 | M | M.VcyED287DndCP (98% identity) | M.VspED004DndCP | |
| 2890 | DNA sulfur modification protein DndD | |||
| 2885 | DNA phosphorothioation system sulfurtransferase | |||
| 2890 | M | M.Vpe662DndDP (99% identity) | M.VspED004DndDP | |
| 2895 | DNA sulfur modification protein DndE | |||
| 2890 | DNA sulfur modification protein DndD | |||
| 2895 | M | M.ValZLV3DndEP (93% identity) | M.VspED004DndEP | |
| 2900 | DGQHR domain-containing protein | |||
| 2905 | 178 aa hypothetical protein | |||
| 2910 | R | VspF190cDptHP (98% identity) | VspED004DptHP | |
| 2915 | DNA phosphorothioation-dependent restriction | |||
| 2915 | DNA phosphorothioation-dependent restriction | |||
| 2920 | R | VspF190cDptFP (98% identity) | VspED004DptFP | |
| 2925 | WYL domain-containing protein | |||
| 6285 | ribulose-phosphate 3-epimerase | |||
| 6290 | M | M.Vsp24DamP (100% identity) | GATC | M.VspED004DamP |
| 6295 | AAA family ATPase | |||
| 11425 | recombinase family protein | |||
| 11430 | R | McaIT9ORF145P (64% identity) | VspED004ORF11435P | |
| 11435 | M | M.Mcr10ORFCP (49% identity) | M.VspED004ORF11435P | |
| 11440 | ATP-binding protein | |||