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Putative Vibrio parahaemolyticus XMM117 RM systems
Ref: Fu,S. unpublished
REBASE ref # 33935
Sequence length: | GenBank #: | |
chromosome I: | 3,518,178 bp | CP064037 |
chromosome II: | 1,998,942 bp | CP064038 |
plasmid pXMM117-2: | 87,025 bp | CP064040 |
REBASE acronym: Vpa117
Org_num: 57904
All begin H9J99_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
130 | DUF4276 family protein | |||
135 | R | Vpa116ORF610P (100% identity) | Vpa117ORF145P | |
140 | ATP-binding protein | |||
145 | M | M.Vpa116ORF610P (100% identity) | M.Vpa117ORF145P | |
150 | S | S.Vpa116ORF610P (100% identity) | S.Vpa117ORF145P | |
155 | SIR2 family protein | |||
2915 | AAA family ATPase | |||
2920 | S | S.Vpa116ORF14225P (100% identity) | S.Vpa117ORF2925P | |
2925 | M | M.VspdhgORF1780P (100% identity) | M.Vpa117ORF2925P | |
2930 | multidrug transporter | |||
2935 | 428 aa hypothetical protein | |||
2940 | R | Vpa116ORF14225P (100% identity) | Vpa117ORF2925P | |
2945 | MarR family transcriptional regulator | |||
4175 | 331 aa hypothetical protein | |||
4180 | S | S.Vpa116ORF12965P (100% identity) | S.Vpa117ORF4185P | |
4185 | M | M.Vpa116ORF12965P (100% identity) | M.Vpa117ORF4185P | |
4190 | 132 aa hypothetical protein | |||
4195 | 49 aa hypothetical protein | |||
4200 | elongation factor Ts | |||
4205 | site-specific DNA-methyltransferase | |||
4210 | R | Vpa116ORF12965P (100% identity) | Vpa117ORF4185P | |
4215 | 806 aa hypothetical protein | |||
5495 | recombinase family protein | |||
5500 | M | M.Vpa116ORF11650P (100% identity) | M.Vpa117ORF5500P | |
5505 | S | S.Vpa116ORF11650P (99% identity) | S.Vpa117ORF5500P | |
5510 | R | Vpa116ORF11650P (100% identity) | Vpa117ORF5500P | |
5515 | 198 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
4200 | elongation factor Ts | |||
4205 | M | M.Vpa116ORF12945P (100% identity) | M.Vpa117ORF4205P | |
4210 | DEAD/DEAH box helicase family protein | |||
15425 | ribulose-phosphate 3-epimerase | |||
15430 | M | M.Vpa116DamP (100% identity) | GATC | M.Vpa117DamP |
15435 | AAA family ATPase | |||
plasmid pXMM117-2 | ||||
26080 | 241 aa hypothetical protein | |||
??? | M | M.Vha7ORF28395P (98% identity) | M.Vpa117ORF26085P | |
26095 | 50 aa hypothetical protein | |||
26225 | 100 aa hypothetical protein | |||
26230 | M | M.VcaC013ORF27080P (92% identity) | M.Vpa117ORF26230P | |
26235 | 60 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
14740 | PAAR domain-containing protein | |||
14745 | R | Vpa116ORF2405P (100% identity) | Vpa117ORF14750P | |
14750 | M | M.Vpa116ORF2405P (100% identity) | M.Vpa117ORF14750P | |
14755 | 201 aa hypothetical protein | |||
chromosome II | ||||
19155 | 571 aa hypothetical protein | |||
19160 | M | M.Vpa116ORF24510P (100% identity) | M.Vpa117ORF19160P | |
19165 | R | Vpa116ORF24510P (100% identity) | Vpa117ORF19160P | |
19170 | 161 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
2950 | AlpA family phage regulatory protein | |||
2955 | R | VspdhgMrrP (100% identity) | Vpa117MrrP | |
2960 | 132 aa hypothetical protein |