Shewanella putrefaciens JNE7 |
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Putative Shewanella putrefaciens JNE7 RM systems
Ref: Li,R. and Zhang,L. unpublished
REBASE ref # 34374
| Sequence length: | GenBank #: | |
| Chromosome: | 4,672,422 bp | CP096166 |
| plasmid pJNE7-NDM: | 137,224 bp | CP096167 |
REBASE acronym: SpuJNE7
Org_num: 57853
All begin MZ097_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6625 | 65 aa hypothetical protein | |||
| 6630 | M | M.Spu102ORF11690P (100% identity) | M.SpuJNE7ORF6630P | |
| 6635 | S | S1.Spu102ORF11690P (100% identity) | S1.SpuJNE7ORF6630P | |
| 6640 | S | S2.Spu102ORF11690P (100% identity) | S2.SpuJNE7ORF6630P | |
| 6645 | Fic family protein | |||
| 6650 | R | Spu102ORF11690P (100% identity) | SpuJNE7ORF6630P | |
| 6655 | OmcA/MtrC family decaheme c-type cytochrome | |||
| 9225 | helix-turn-helix domain-containing protein | |||
| 9230 | M | M.Spu102ORF14290P (100% identity) | M.SpuJNE7ORF9230P | |
| 9235 | S | S.Spu102ORF14290P (100% identity) | S.SpuJNE7ORF9230P | |
| 9240 | 141 aa hypothetical protein | |||
| 9245 | DUF86 domain-containing protein | |||
| 9250 | R | Spu102ORF14290P (100% identity) | SpuJNE7ORF9230P | |
| 9255 | 59 aa hypothetical protein | |||
| 10245 | IS3 family transposase | |||
| 10250 | M | M.SpuJNE7ORF20185P (100% identity) | M.SpuJNE7ORF10250P | |
| 10255 | S | S.SpuJNE7ORF20185P (100% identity) | S.SpuJNE7ORF10250P | |
| 10260 | PD-(D/E)XK nuclease family protein | |||
| 10265 | R | SpuJNE7ORF20185P (100% identity) | SpuJNE7ORF10250P | |
| 10270 | Tn3 family transposase | |||
| 15485 | AAA family ATPase | |||
| 15490 | R | Spu12093ORF2938P (100% identity) | SpuJNE7ORF15505P | |
| 15495 | BstXI family restriction endonuclease | |||
| 15500 | S | S.VchSXTORFAP (100% identity) | S.SpuJNE7ORF15505P | |
| 15505 | M | M.VchSXTORFAP (100% identity) | M.SpuJNE7ORF15505P | |
| 15510 | WYL domain-containing protein | |||
| 18775 | 293 aa hypothetical protein | |||
| 18780 | R | Spu102ORF3115P (100% identity) | SpuJNE7ORF18780P | |
| 18785 | adenosine monophosphate-protein transferase Fic | |||
| 20165 | IS5-like element ISSpu16 family transposase | |||
| 20170 | R | SpuJNE7ORF10250P (100% identity) | SpuJNE7ORF20185P | |
| 20175 | PD-(D/E)XK nuclease family protein | |||
| 20180 | S | S.SpuJNE7ORF10250P (100% identity) | S.SpuJNE7ORF20185P | |
| 20185 | M | M.SpuJNE7ORF10250P (100% identity) | M.SpuJNE7ORF20185P | |
| 20190 | SIR2 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15490 | type I restriction endonuclease subunit R | |||
| 15495 | R | Vch2387ORFEP (100% identity) | SpuJNE7ORF15495P | |
| 15500 | restriction endonuclease subunit S | |||
| plasmid pJNE7-NDM | ||||
| 21070 | 100 aa hypothetical protein | |||
| 21075 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.SpuJNE7ORF21075P |
| 21080 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15470 | 93 aa hypothetical protein | |||
| 15475 | R | Vch216MrrP (100% identity) | SpuJNE7MrrP | |
| 15480 | 5-methylcytosine-specific restriction | |||
| 15475 | restriction endonuclease | |||
| 15480 | R | VchSXTMcrCP (100% identity) | SpuJNE7McrCP | |
| 15485 | R | Spu12093McrBP (100% identity) | SpuJNE7McrBP | |
| 15490 | type I restriction endonuclease subunit R | |||
| 19050 | LysR family transcriptional regulator | |||
| 19055 | R | Spu102ORF3390P (100% identity) | SpuJNE7ORF19055P | |
| 19060 | Fic family protein | |||